Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Sfi1-203ENSMUST00000101655 3888 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Ighv13-1-201ENSMUST00000103480 294 ntBASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gm6158-201ENSMUST00000109467 904 ntBASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gm16288-201ENSMUST00000137940 367 ntBASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gm8918-201ENSMUST00000190587 1087 ntBASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gm5298-201ENSMUST00000201122 892 ntBASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gm8170-201ENSMUST00000218581 945 ntBASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Slco5a1-204ENSMUST00000136197 5123 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Gm15784-201ENSMUST00000120260 1462 ntBASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Gm13022-201ENSMUST00000121181 285 ntBASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Gm6423-201ENSMUST00000204315 934 ntBASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 CT009764.1-201ENSMUST00000222260 483 ntBASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 AC102847.1-202ENSMUST00000226313 1245 ntBASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61a2Q9JLR1 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms