Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm4604-201ENSMUST00000025040 390 ntBASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm7536-201ENSMUST00000077389 444 ntBASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61a2Q9JLR1 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Slc5a1-201ENSMUST00000011178 4104 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm43112-201ENSMUST00000196665 3122 ntBASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm15782-201ENSMUST00000121073 445 ntBASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm22876-201ENSMUST00000175450 298 ntBASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm38313-201ENSMUST00000191953 1266 ntBASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm18706-201ENSMUST00000210053 1066 ntBASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm18035-201ENSMUST00000211962 589 ntBASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 AC154572.1-201ENSMUST00000226098 1204 ntBASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Atp7b-201ENSMUST00000006742 6505 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Zbtb34-202ENSMUST00000113158 6602 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 St5-202ENSMUST00000079282 4255 ntAPPRIS P4 TSL 5 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Sec61a2Q9JLR1 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
Sec61a2Q9JLR1 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms