Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clrn1Q8K445 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Gm12912-201ENSMUST00000121596 1381 ntBASIC9.79□□□□□ -0.84
Clrn1Q8K445 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Mir291b-201ENSMUST00000104838 79 ntBASIC9.79□□□□□ -0.84
Clrn1Q8K445 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Gm13039-201ENSMUST00000118638 794 ntBASIC9.79□□□□□ -0.84
Clrn1Q8K445 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Gm18463-201ENSMUST00000207258 474 ntBASIC9.79□□□□□ -0.84
Clrn1Q8K445 Gm18460-201ENSMUST00000208088 464 ntBASIC9.79□□□□□ -0.84
Clrn1Q8K445 Gm45745-201ENSMUST00000211447 1180 ntBASIC9.79□□□□□ -0.84
Clrn1Q8K445 AC162932.1-201ENSMUST00000219209 872 ntBASIC9.79□□□□□ -0.84
Clrn1Q8K445 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Tulp4-209ENSMUST00000149756 8784 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Sfi1-203ENSMUST00000101655 3888 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clrn1Q8K445 Gm43167-201ENSMUST00000202001 1606 ntBASIC9.78□□□□□ -0.84
Clrn1Q8K445 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm13498-201ENSMUST00000119159 2166 ntBASIC9.78□□□□□ -0.84
Clrn1Q8K445 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Atp10d-202ENSMUST00000126664 6052 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm5472-201ENSMUST00000178604 1678 ntBASIC9.78□□□□□ -0.84
Clrn1Q8K445 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm22344-201ENSMUST00000122642 278 ntBASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm23081-201ENSMUST00000157845 297 ntBASIC9.78□□□□□ -0.84
Clrn1Q8K445 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm17070-201ENSMUST00000170463 784 ntBASIC9.78□□□□□ -0.84
Clrn1Q8K445 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm44647-201ENSMUST00000207402 428 ntBASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm45363-201ENSMUST00000210196 1294 ntBASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm35713-201ENSMUST00000210516 199 ntBASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC9.78□□□□□ -0.84
Clrn1Q8K445 AC134860.2-201ENSMUST00000225277 1036 ntBASIC9.78□□□□□ -0.84
Clrn1Q8K445 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Clrn1Q8K445 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms