Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cdx2P43241 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Gm5046-201ENSMUST00000100608 611 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Cdx2P43241 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 Gm14108-201ENSMUST00000122234 494 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 Gm12221-201ENSMUST00000125096 1131 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 Gm7847-201ENSMUST00000151645 777 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Gm22669-201ENSMUST00000158723 318 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 Gm24180-201ENSMUST00000179961 110 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 Gm6463-201ENSMUST00000182090 966 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 Gm4398-201ENSMUST00000182698 992 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Cdx2P43241 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC9.89□□□□□ -0.83
Cdx2P43241 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 AC124772.3-201ENSMUST00000222535 575 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 AC132881.1-201ENSMUST00000223780 1062 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 Gm8256-202ENSMUST00000227964 828 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC9.89□□□□□ -0.83
Cdx2P43241 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC9.89□□□□□ -0.83
Cdx2P43241 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.89□□□□□ -0.83
Cdx2P43241 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cdx2P43241 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.89□□□□□ -0.83
Cdx2P43241 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cdx2P43241 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cdx2P43241 Mbtd1-206ENSMUST00000107854 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cdx2P43241 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cdx2P43241 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC9.88□□□□□ -0.83
Cdx2P43241 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cdx2P43241 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cdx2P43241 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.88□□□□□ -0.83
Cdx2P43241 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Katnal2-211ENSMUST00000154665 1515 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cdx2P43241 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.88□□□□□ -0.83
Cdx2P43241 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.88□□□□□ -0.83
Cdx2P43241 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Gm15264-201ENSMUST00000118050 502 ntBASIC9.88□□□□□ -0.83
Cdx2P43241 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Cdx2P43241 Gm16574-201ENSMUST00000159301 745 ntBASIC9.88□□□□□ -0.83
Cdx2P43241 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Gm2328-201ENSMUST00000193525 535 ntBASIC9.88□□□□□ -0.83
Cdx2P43241 Gm37301-201ENSMUST00000195412 568 ntBASIC9.88□□□□□ -0.83
Cdx2P43241 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC9.88□□□□□ -0.83
Cdx2P43241 AC129590.1-201ENSMUST00000225573 852 ntBASIC9.88□□□□□ -0.83
Cdx2P43241 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cdx2P43241 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cdx2P43241 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.88□□□□□ -0.83
Cdx2P43241 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cdx2P43241 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cdx2P43241 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cdx2P43241 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms