Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1P40201 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC15.22■□□□□ 0.03
Chd1P40201 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1P40201 Hpx-201ENSMUST00000033185 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1P40201 S100a16-203ENSMUST00000107331 723 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Chd1P40201 Gm15285-201ENSMUST00000119271 473 ntBASIC15.22■□□□□ 0.03
Chd1P40201 Gm2541-201ENSMUST00000161209 711 ntBASIC15.22■□□□□ 0.03
Chd1P40201 Snca-202ENSMUST00000163779 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1P40201 Ly6g6c-203ENSMUST00000174876 723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1P40201 Gm6669-201ENSMUST00000179088 997 ntBASIC15.22■□□□□ 0.03
Chd1P40201 Gm3466-201ENSMUST00000181797 1192 ntBASIC15.22■□□□□ 0.03
Chd1P40201 Gm4889-201ENSMUST00000075321 444 ntBASIC15.22■□□□□ 0.03
Chd1P40201 Gm6028-201ENSMUST00000077111 574 ntBASIC15.22■□□□□ 0.03
Chd1P40201 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1P40201 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1P40201 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1P40201 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1P40201 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd1P40201 Gm26911-201ENSMUST00000181770 1737 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Snap47-201ENSMUST00000010038 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Gm16575-201ENSMUST00000162186 1615 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Gm23061-201ENSMUST00000102348 116 ntBASIC15.21■□□□□ 0.03
Chd1P40201 Gm14083-201ENSMUST00000117873 620 ntBASIC15.21■□□□□ 0.03
Chd1P40201 Gm8814-201ENSMUST00000119072 535 ntBASIC15.21■□□□□ 0.03
Chd1P40201 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 4933404K13Rik-203ENSMUST00000217125 1060 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Olfr1279-201ENSMUST00000090329 942 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Chd1P40201 Sfmbt2-203ENSMUST00000114862 1763 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC15.21■□□□□ 0.03
Chd1P40201 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Chd1P40201 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Hsd11b1-205ENSMUST00000161737 1355 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd1P40201 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd1P40201 Gm44992-210ENSMUST00000210126 1330 ntTSL 5 BASIC15.21■□□□□ 0.02
Chd1P40201 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Chd1P40201 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC15.21■□□□□ 0.02
Chd1P40201 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC15.2■□□□□ 0.02
Chd1P40201 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Fthl17-ps1-201ENSMUST00000120058 516 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Gm2666-201ENSMUST00000160587 891 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Art2a-ps-201ENSMUST00000173420 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 1700019P21Rik-201ENSMUST00000186955 411 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Gm37994-201ENSMUST00000192124 409 ntBASIC15.2■□□□□ 0.02
Chd1P40201 4930553I04Rik-201ENSMUST00000196722 670 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Gm9662-201ENSMUST00000216748 1206 ntBASIC15.2■□□□□ 0.02
Chd1P40201 AC144461.2-201ENSMUST00000218219 303 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Gm4257-201ENSMUST00000222877 513 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Sftpc-201ENSMUST00000022692 792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Gm10272-201ENSMUST00000092371 350 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Chd1P40201 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.2■□□□□ 0.02
Chd1P40201 4921515L22Rik-201ENSMUST00000218993 1537 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Gm45286-201ENSMUST00000209267 1350 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Chd1P40201 Gm1995-201ENSMUST00000220838 2602 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC15.2■□□□□ 0.02
Chd1P40201 Gm37969-201ENSMUST00000195777 3409 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Gm25608-201ENSMUST00000104021 132 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Gm24013-201ENSMUST00000157727 99 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Gm7083-201ENSMUST00000178617 450 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Gm8079-201ENSMUST00000182695 975 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Gm38306-201ENSMUST00000193954 237 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC15.2■□□□□ 0.02
Chd1P40201 AC161117.2-201ENSMUST00000221908 451 ntBASIC15.2■□□□□ 0.02
Chd1P40201 Taar3-201ENSMUST00000045152 1032 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Chd1P40201 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Chd1P40201 Defb6-201ENSMUST00000063112 323 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC15.2■□□□□ 0.02
Chd1P40201 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Chd1P40201 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Chd1P40201 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd1P40201 Tcf7l2-208ENSMUST00000111654 3059 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Chd1P40201 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1P40201 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1P40201 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Chd1P40201 Elavl2-203ENSMUST00000107109 1591 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Chd1P40201 Elavl2-205ENSMUST00000107111 1552 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Chd1P40201 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd1P40201 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd1P40201 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC15.19■□□□□ 0.02
Chd1P40201 Gm24325-201ENSMUST00000175344 74 ntBASIC15.19■□□□□ 0.02
Chd1P40201 Gm29434-201ENSMUST00000187426 260 ntBASIC15.19■□□□□ 0.02
Chd1P40201 AC153864.1-201ENSMUST00000218482 523 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms