Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm38116-201ENSMUST00000193873 1533 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm5403-201ENSMUST00000117105 2795 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm7851-201ENSMUST00000117574 323 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm13422-201ENSMUST00000118834 504 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm11836-201ENSMUST00000121022 441 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC8.5□□□□□ -1.05
Hmgb3O54879 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm37020-201ENSMUST00000195303 992 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm38312-201ENSMUST00000195426 1746 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm44315-201ENSMUST00000203041 219 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm6905-201ENSMUST00000205729 511 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm18466-201ENSMUST00000209147 499 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Abhd11os-203ENSMUST00000222613 363 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 AC154431.1-201ENSMUST00000224910 880 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Rab11fip3-201ENSMUST00000118828 3271 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm42974-201ENSMUST00000199556 2654 ntBASIC8.5□□□□□ -1.05
Hmgb3O54879 Wdr35-201ENSMUST00000085745 4501 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 2410002F23Rik-202ENSMUST00000071296 4201 ntAPPRIS P2 TSL 2 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm9979-201ENSMUST00000069457 3005 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Kif23-201ENSMUST00000034815 3398 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Pcdhga5-201ENSMUST00000193414 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Pcdhb4-201ENSMUST00000056712 3718 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Garnl3-207ENSMUST00000137381 3551 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hmgb3O54879 Mfsd2b-204ENSMUST00000137337 2641 ntTSL 2 BASIC8.5□□□□□ -1.05
Hmgb3O54879 Nek6-201ENSMUST00000054234 10338 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Mov10-207ENSMUST00000168015 3460 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Ccdc40-202ENSMUST00000053440 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC8.49□□□□□ -1.05
Hmgb3O54879 Mrpl47-201ENSMUST00000043966 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
Hmgb3O54879 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Hmgb3O54879 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Wnk4-201ENSMUST00000103108 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Hmgb3O54879 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Atp4a-201ENSMUST00000005692 3485 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Hmgb3O54879 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Gm22711-201ENSMUST00000116890 133 ntBASIC8.49□□□□□ -1.05
Hmgb3O54879 Gm13035-201ENSMUST00000117496 342 ntBASIC8.49□□□□□ -1.05
Hmgb3O54879 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC8.49□□□□□ -1.05
Hmgb3O54879 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Gm5244-201ENSMUST00000164001 339 ntBASIC8.49□□□□□ -1.05
Hmgb3O54879 Gm6407-201ENSMUST00000176468 549 ntBASIC8.49□□□□□ -1.05
Hmgb3O54879 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Hmgb3O54879 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC8.49□□□□□ -1.05
Hmgb3O54879 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC8.49□□□□□ -1.05
Hmgb3O54879 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC8.49□□□□□ -1.05
Hmgb3O54879 BX649293.1-201ENSMUST00000227437 631 ntBASIC8.49□□□□□ -1.05
Hmgb3O54879 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Hmgb3O54879 Gm7551-201ENSMUST00000089593 1074 ntBASIC8.49□□□□□ -1.05
Hmgb3O54879 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Hmgb3O54879 Osbpl3-201ENSMUST00000071728 3307 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hmgb3O54879 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms