Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Upk1bQ9Z2C6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1bQ9Z2C6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1bQ9Z2C6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1bQ9Z2C6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1bQ9Z2C6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1bQ9Z2C6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1bQ9Z2C6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1bQ9Z2C6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Upk1bQ9Z2C6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upk1bQ9Z2C6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Upk1bQ9Z2C6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upk1bQ9Z2C6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk1bQ9Z2C6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1bQ9Z2C6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1bQ9Z2C6 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.31■□□□□ 0.52
Upk1bQ9Z2C6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.31■□□□□ 0.52
Upk1bQ9Z2C6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.31■□□□□ 0.52
Upk1bQ9Z2C6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.31■□□□□ 0.52
Upk1bQ9Z2C6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1bQ9Z2C6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1bQ9Z2C6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk1bQ9Z2C6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.31■□□□□ 0.52
Upk1bQ9Z2C6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Golph3-205ENSMUST00000228671 2842 ntBASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Upk1bQ9Z2C6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk1bQ9Z2C6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Upk1bQ9Z2C6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Upk1bQ9Z2C6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.29■□□□□ 0.52
Upk1bQ9Z2C6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Upk1bQ9Z2C6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk1bQ9Z2C6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk1bQ9Z2C6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1bQ9Z2C6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1bQ9Z2C6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1bQ9Z2C6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1bQ9Z2C6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Upk1bQ9Z2C6 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.28■□□□□ 0.52
Upk1bQ9Z2C6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.28■□□□□ 0.52
Upk1bQ9Z2C6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1bQ9Z2C6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1bQ9Z2C6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Upk1bQ9Z2C6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.27■□□□□ 0.52
Upk1bQ9Z2C6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk1bQ9Z2C6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms