Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn6Q9Z262 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cldn6Q9Z262 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn6Q9Z262 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn6Q9Z262 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.6■□□□□ 0.57
Cldn6Q9Z262 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn6Q9Z262 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.59■□□□□ 0.57
Cldn6Q9Z262 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.59■□□□□ 0.57
Cldn6Q9Z262 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn6Q9Z262 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn6Q9Z262 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn6Q9Z262 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn6Q9Z262 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cldn6Q9Z262 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn6Q9Z262 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn6Q9Z262 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.58■□□□□ 0.56
Cldn6Q9Z262 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn6Q9Z262 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn6Q9Z262 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.58■□□□□ 0.56
Cldn6Q9Z262 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn6Q9Z262 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn6Q9Z262 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cldn6Q9Z262 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Cldn6Q9Z262 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.57■□□□□ 0.56
Cldn6Q9Z262 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn6Q9Z262 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn6Q9Z262 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn6Q9Z262 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn6Q9Z262 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn6Q9Z262 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn6Q9Z262 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn6Q9Z262 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn6Q9Z262 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn6Q9Z262 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn6Q9Z262 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn6Q9Z262 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cldn6Q9Z262 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.55■□□□□ 0.56
Cldn6Q9Z262 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.55■□□□□ 0.56
Cldn6Q9Z262 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn6Q9Z262 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn6Q9Z262 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn6Q9Z262 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cldn6Q9Z262 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn6Q9Z262 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Cldn6Q9Z262 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn6Q9Z262 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn6Q9Z262 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.55■□□□□ 0.56
Cldn6Q9Z262 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cldn6Q9Z262 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.54■□□□□ 0.56
Cldn6Q9Z262 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn6Q9Z262 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn6Q9Z262 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn6Q9Z262 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Cldn6Q9Z262 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.53■□□□□ 0.56
Cldn6Q9Z262 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn6Q9Z262 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn6Q9Z262 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn6Q9Z262 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn6Q9Z262 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn6Q9Z262 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.53■□□□□ 0.56
Cldn6Q9Z262 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn6Q9Z262 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn6Q9Z262 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn6Q9Z262 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn6Q9Z262 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cldn6Q9Z262 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn6Q9Z262 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn6Q9Z262 Gm9847-201ENSMUST00000052528 599 ntBASIC18.52■□□□□ 0.56
Cldn6Q9Z262 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Cldn6Q9Z262 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cldn6Q9Z262 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cldn6Q9Z262 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Cldn6Q9Z262 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cldn6Q9Z262 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Cldn6Q9Z262 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cldn6Q9Z262 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cldn6Q9Z262 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cldn6Q9Z262 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cldn6Q9Z262 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cldn6Q9Z262 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn6Q9Z262 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn6Q9Z262 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn6Q9Z262 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn6Q9Z262 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cldn6Q9Z262 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.5■□□□□ 0.55
Cldn6Q9Z262 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms