Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.23■□□□□ 0.83
Clcn2Q9R0A1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.22■□□□□ 0.83
Clcn2Q9R0A1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn2Q9R0A1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn2Q9R0A1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn2Q9R0A1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.21■□□□□ 0.83
Clcn2Q9R0A1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn2Q9R0A1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn2Q9R0A1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn2Q9R0A1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn2Q9R0A1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn2Q9R0A1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn2Q9R0A1 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.2■□□□□ 0.82
Clcn2Q9R0A1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn2Q9R0A1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Clcn2Q9R0A1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Clcn2Q9R0A1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn2Q9R0A1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn2Q9R0A1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn2Q9R0A1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn2Q9R0A1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn2Q9R0A1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Clcn2Q9R0A1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.19■□□□□ 0.82
Clcn2Q9R0A1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.19■□□□□ 0.82
Clcn2Q9R0A1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn2Q9R0A1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn2Q9R0A1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn2Q9R0A1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Clcn2Q9R0A1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Clcn2Q9R0A1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn2Q9R0A1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn2Q9R0A1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn2Q9R0A1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn2Q9R0A1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn2Q9R0A1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn2Q9R0A1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.18■□□□□ 0.82
Clcn2Q9R0A1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.18■□□□□ 0.82
Clcn2Q9R0A1 Gm12922-201ENSMUST00000120626 809 ntBASIC20.18■□□□□ 0.82
Clcn2Q9R0A1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Clcn2Q9R0A1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn2Q9R0A1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Clcn2Q9R0A1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.17■□□□□ 0.82
Clcn2Q9R0A1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn2Q9R0A1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn2Q9R0A1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.17■□□□□ 0.82
Clcn2Q9R0A1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn2Q9R0A1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn2Q9R0A1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn2Q9R0A1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn2Q9R0A1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.16■□□□□ 0.82
Clcn2Q9R0A1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.16■□□□□ 0.82
Clcn2Q9R0A1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.16■□□□□ 0.82
Clcn2Q9R0A1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn2Q9R0A1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn2Q9R0A1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn2Q9R0A1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.16■□□□□ 0.82
Clcn2Q9R0A1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Clcn2Q9R0A1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.16■□□□□ 0.82
Clcn2Q9R0A1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn2Q9R0A1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn2Q9R0A1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn2Q9R0A1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn2Q9R0A1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.15■□□□□ 0.82
Clcn2Q9R0A1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn2Q9R0A1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
Clcn2Q9R0A1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.15■□□□□ 0.82
Clcn2Q9R0A1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Clcn2Q9R0A1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Clcn2Q9R0A1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Clcn2Q9R0A1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn2Q9R0A1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn2Q9R0A1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Clcn2Q9R0A1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.14■□□□□ 0.81
Clcn2Q9R0A1 Gm9870-201ENSMUST00000063874 645 ntBASIC20.14■□□□□ 0.81
Clcn2Q9R0A1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
Clcn2Q9R0A1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn2Q9R0A1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn2Q9R0A1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.13■□□□□ 0.81
Clcn2Q9R0A1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn2Q9R0A1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Clcn2Q9R0A1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn2Q9R0A1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn2Q9R0A1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.13■□□□□ 0.81
Clcn2Q9R0A1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.13■□□□□ 0.81
Clcn2Q9R0A1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn2Q9R0A1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn2Q9R0A1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms