Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SrfQ9JM73 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.83■□□□□ 0.6
SrfQ9JM73 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.83■□□□□ 0.6
SrfQ9JM73 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SrfQ9JM73 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.83■□□□□ 0.6
SrfQ9JM73 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SrfQ9JM73 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SrfQ9JM73 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SrfQ9JM73 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SrfQ9JM73 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SrfQ9JM73 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.82■□□□□ 0.6
SrfQ9JM73 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SrfQ9JM73 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SrfQ9JM73 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SrfQ9JM73 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SrfQ9JM73 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SrfQ9JM73 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SrfQ9JM73 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SrfQ9JM73 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SrfQ9JM73 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SrfQ9JM73 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SrfQ9JM73 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SrfQ9JM73 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SrfQ9JM73 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SrfQ9JM73 Nespas-201ENSMUST00000143738 1083 ntBASIC18.8■□□□□ 0.6
SrfQ9JM73 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SrfQ9JM73 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SrfQ9JM73 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.8■□□□□ 0.6
SrfQ9JM73 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SrfQ9JM73 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SrfQ9JM73 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SrfQ9JM73 Gm7290-201ENSMUST00000104990 617 ntBASIC18.79■□□□□ 0.6
SrfQ9JM73 Gm12918-201ENSMUST00000120234 636 ntBASIC18.79■□□□□ 0.6
SrfQ9JM73 Gm15710-201ENSMUST00000121821 636 ntBASIC18.79■□□□□ 0.6
SrfQ9JM73 Gm5075-201ENSMUST00000196916 622 ntBASIC18.79■□□□□ 0.6
SrfQ9JM73 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SrfQ9JM73 Gm4968-201ENSMUST00000071458 858 ntBASIC18.79■□□□□ 0.6
SrfQ9JM73 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.79■□□□□ 0.6
SrfQ9JM73 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.79■□□□□ 0.6
SrfQ9JM73 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SrfQ9JM73 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SrfQ9JM73 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SrfQ9JM73 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SrfQ9JM73 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.78■□□□□ 0.6
SrfQ9JM73 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SrfQ9JM73 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SrfQ9JM73 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SrfQ9JM73 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SrfQ9JM73 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SrfQ9JM73 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SrfQ9JM73 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SrfQ9JM73 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SrfQ9JM73 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SrfQ9JM73 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SrfQ9JM73 Gm13146-201ENSMUST00000118508 780 ntBASIC18.77■□□□□ 0.6
SrfQ9JM73 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SrfQ9JM73 Gm20760-201ENSMUST00000179197 648 ntBASIC18.77■□□□□ 0.6
SrfQ9JM73 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SrfQ9JM73 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SrfQ9JM73 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SrfQ9JM73 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SrfQ9JM73 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SrfQ9JM73 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SrfQ9JM73 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.76■□□□□ 0.59
SrfQ9JM73 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SrfQ9JM73 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SrfQ9JM73 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SrfQ9JM73 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SrfQ9JM73 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SrfQ9JM73 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.76■□□□□ 0.59
SrfQ9JM73 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SrfQ9JM73 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SrfQ9JM73 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SrfQ9JM73 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SrfQ9JM73 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SrfQ9JM73 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SrfQ9JM73 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SrfQ9JM73 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SrfQ9JM73 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SrfQ9JM73 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SrfQ9JM73 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SrfQ9JM73 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SrfQ9JM73 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SrfQ9JM73 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SrfQ9JM73 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SrfQ9JM73 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SrfQ9JM73 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.74■□□□□ 0.59
SrfQ9JM73 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SrfQ9JM73 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SrfQ9JM73 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.74■□□□□ 0.59
SrfQ9JM73 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.74■□□□□ 0.59
SrfQ9JM73 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.74■□□□□ 0.59
SrfQ9JM73 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SrfQ9JM73 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SrfQ9JM73 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.74■□□□□ 0.59
SrfQ9JM73 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SrfQ9JM73 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SrfQ9JM73 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SrfQ9JM73 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SrfQ9JM73 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms