Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.75■□□□□ 0.43
Sec61a2Q9JLR1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.75■□□□□ 0.43
Sec61a2Q9JLR1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a2Q9JLR1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a2Q9JLR1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a2Q9JLR1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a2Q9JLR1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sec61a2Q9JLR1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.75■□□□□ 0.43
Sec61a2Q9JLR1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sec61a2Q9JLR1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sec61a2Q9JLR1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Iqck-206ENSMUST00000208658 2891 ntBASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Gm21956-201ENSMUST00000179946 522 ntBASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Gm9847-201ENSMUST00000052528 599 ntBASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sec61a2Q9JLR1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Sec61a2Q9JLR1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a2Q9JLR1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a2Q9JLR1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Sec61a2Q9JLR1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.71■□□□□ 0.43
Sec61a2Q9JLR1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a2Q9JLR1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sec61a2Q9JLR1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sec61a2Q9JLR1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sec61a2Q9JLR1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sec61a2Q9JLR1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.7■□□□□ 0.42
Sec61a2Q9JLR1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms