Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn5aQ9JJV9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn5aQ9JJV9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn5aQ9JJV9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn5aQ9JJV9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn5aQ9JJV9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.76■□□□□ 0.91
Scn5aQ9JJV9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.76■□□□□ 0.91
Scn5aQ9JJV9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Scn5aQ9JJV9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn5aQ9JJV9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Scn5aQ9JJV9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn5aQ9JJV9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Scn5aQ9JJV9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn5aQ9JJV9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn5aQ9JJV9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn5aQ9JJV9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scn5aQ9JJV9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn5aQ9JJV9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn5aQ9JJV9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn5aQ9JJV9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Scn5aQ9JJV9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn5aQ9JJV9 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.74■□□□□ 0.91
Scn5aQ9JJV9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn5aQ9JJV9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn5aQ9JJV9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Scn5aQ9JJV9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.74■□□□□ 0.91
Scn5aQ9JJV9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scn5aQ9JJV9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scn5aQ9JJV9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn5aQ9JJV9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn5aQ9JJV9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn5aQ9JJV9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Scn5aQ9JJV9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scn5aQ9JJV9 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.73■□□□□ 0.91
Scn5aQ9JJV9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scn5aQ9JJV9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn5aQ9JJV9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.72■□□□□ 0.91
Scn5aQ9JJV9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn5aQ9JJV9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn5aQ9JJV9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn5aQ9JJV9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.71■□□□□ 0.91
Scn5aQ9JJV9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.71■□□□□ 0.91
Scn5aQ9JJV9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn5aQ9JJV9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn5aQ9JJV9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Scn5aQ9JJV9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn5aQ9JJV9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn5aQ9JJV9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Scn5aQ9JJV9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.7■□□□□ 0.9
Scn5aQ9JJV9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.7■□□□□ 0.9
Scn5aQ9JJV9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn5aQ9JJV9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn5aQ9JJV9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn5aQ9JJV9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scn5aQ9JJV9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn5aQ9JJV9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.69■□□□□ 0.9
Scn5aQ9JJV9 Gm10653-202ENSMUST00000139570 835 ntBASIC20.69■□□□□ 0.9
Scn5aQ9JJV9 Mir5133-201ENSMUST00000174955 77 ntBASIC20.69■□□□□ 0.9
Scn5aQ9JJV9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn5aQ9JJV9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn5aQ9JJV9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Scn5aQ9JJV9 Gm4968-201ENSMUST00000071458 858 ntBASIC20.68■□□□□ 0.9
Scn5aQ9JJV9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn5aQ9JJV9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn5aQ9JJV9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn5aQ9JJV9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn5aQ9JJV9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.68■□□□□ 0.9
Scn5aQ9JJV9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn5aQ9JJV9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn5aQ9JJV9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn5aQ9JJV9 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.67■□□□□ 0.9
Scn5aQ9JJV9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn5aQ9JJV9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.66■□□□□ 0.9
Scn5aQ9JJV9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.66■□□□□ 0.9
Scn5aQ9JJV9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn5aQ9JJV9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.66■□□□□ 0.9
Scn5aQ9JJV9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.66■□□□□ 0.9
Scn5aQ9JJV9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn5aQ9JJV9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn5aQ9JJV9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scn5aQ9JJV9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scn5aQ9JJV9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scn5aQ9JJV9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scn5aQ9JJV9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.64■□□□□ 0.89
Scn5aQ9JJV9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn5aQ9JJV9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn5aQ9JJV9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.63■□□□□ 0.89
Scn5aQ9JJV9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms