Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpf2Q9JJ80 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpf2Q9JJ80 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rpf2Q9JJ80 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpf2Q9JJ80 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpf2Q9JJ80 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpf2Q9JJ80 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpf2Q9JJ80 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rpf2Q9JJ80 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rpf2Q9JJ80 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpf2Q9JJ80 Mir6236-201ENSMUST00000184437 123 ntBASIC21.1■□□□□ 0.97
Rpf2Q9JJ80 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpf2Q9JJ80 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Rpf2Q9JJ80 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpf2Q9JJ80 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rpf2Q9JJ80 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rpf2Q9JJ80 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rpf2Q9JJ80 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpf2Q9JJ80 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rpf2Q9JJ80 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rpf2Q9JJ80 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.09■□□□□ 0.97
Rpf2Q9JJ80 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.09■□□□□ 0.97
Rpf2Q9JJ80 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rpf2Q9JJ80 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpf2Q9JJ80 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpf2Q9JJ80 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpf2Q9JJ80 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.08■□□□□ 0.97
Rpf2Q9JJ80 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rpf2Q9JJ80 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rpf2Q9JJ80 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Rpf2Q9JJ80 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Rpf2Q9JJ80 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpf2Q9JJ80 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpf2Q9JJ80 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.07■□□□□ 0.96
Rpf2Q9JJ80 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpf2Q9JJ80 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpf2Q9JJ80 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpf2Q9JJ80 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rpf2Q9JJ80 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpf2Q9JJ80 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.06■□□□□ 0.96
Rpf2Q9JJ80 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.06■□□□□ 0.96
Rpf2Q9JJ80 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpf2Q9JJ80 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpf2Q9JJ80 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpf2Q9JJ80 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpf2Q9JJ80 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpf2Q9JJ80 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpf2Q9JJ80 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpf2Q9JJ80 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpf2Q9JJ80 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.05■□□□□ 0.96
Rpf2Q9JJ80 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rpf2Q9JJ80 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rpf2Q9JJ80 Gm40881-201ENSMUST00000223397 166 ntBASIC21.05■□□□□ 0.96
Rpf2Q9JJ80 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpf2Q9JJ80 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rpf2Q9JJ80 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpf2Q9JJ80 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Rpf2Q9JJ80 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpf2Q9JJ80 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpf2Q9JJ80 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.04■□□□□ 0.96
Rpf2Q9JJ80 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpf2Q9JJ80 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rpf2Q9JJ80 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpf2Q9JJ80 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Rpf2Q9JJ80 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpf2Q9JJ80 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpf2Q9JJ80 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpf2Q9JJ80 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpf2Q9JJ80 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpf2Q9JJ80 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpf2Q9JJ80 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpf2Q9JJ80 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpf2Q9JJ80 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rpf2Q9JJ80 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rpf2Q9JJ80 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpf2Q9JJ80 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Rpf2Q9JJ80 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpf2Q9JJ80 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.02■□□□□ 0.96
Rpf2Q9JJ80 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.02■□□□□ 0.96
Rpf2Q9JJ80 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpf2Q9JJ80 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rpf2Q9JJ80 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rpf2Q9JJ80 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpf2Q9JJ80 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpf2Q9JJ80 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpf2Q9JJ80 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpf2Q9JJ80 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpf2Q9JJ80 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpf2Q9JJ80 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Rpf2Q9JJ80 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpf2Q9JJ80 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpf2Q9JJ80 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rpf2Q9JJ80 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpf2Q9JJ80 Gm43530-201ENSMUST00000195920 274 ntBASIC21■□□□□ 0.95
Rpf2Q9JJ80 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rpf2Q9JJ80 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21■□□□□ 0.95
Rpf2Q9JJ80 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpf2Q9JJ80 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rpf2Q9JJ80 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Rpf2Q9JJ80 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms