Protein–RNA interactions for Protein: Q9JI58

Raet1d, Retinoic acid early-inducible protein 1-delta, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1dQ9JI58 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Raet1dQ9JI58 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Raet1dQ9JI58 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1dQ9JI58 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Raet1dQ9JI58 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Raet1dQ9JI58 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.33■□□□□ 0.53
Raet1dQ9JI58 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Raet1dQ9JI58 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.33■□□□□ 0.53
Raet1dQ9JI58 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Raet1dQ9JI58 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Raet1dQ9JI58 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
Raet1dQ9JI58 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
Raet1dQ9JI58 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Raet1dQ9JI58 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Raet1dQ9JI58 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Raet1dQ9JI58 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Raet1dQ9JI58 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Raet1dQ9JI58 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.33■□□□□ 0.52
Raet1dQ9JI58 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Raet1dQ9JI58 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raet1dQ9JI58 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Raet1dQ9JI58 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Raet1dQ9JI58 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.32■□□□□ 0.52
Raet1dQ9JI58 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.32■□□□□ 0.52
Raet1dQ9JI58 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raet1dQ9JI58 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raet1dQ9JI58 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raet1dQ9JI58 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raet1dQ9JI58 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raet1dQ9JI58 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.31■□□□□ 0.52
Raet1dQ9JI58 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Raet1dQ9JI58 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.31■□□□□ 0.52
Raet1dQ9JI58 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Raet1dQ9JI58 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raet1dQ9JI58 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raet1dQ9JI58 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raet1dQ9JI58 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Raet1dQ9JI58 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raet1dQ9JI58 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.31■□□□□ 0.52
Raet1dQ9JI58 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raet1dQ9JI58 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raet1dQ9JI58 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Raet1dQ9JI58 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raet1dQ9JI58 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raet1dQ9JI58 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.3■□□□□ 0.52
Raet1dQ9JI58 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raet1dQ9JI58 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Raet1dQ9JI58 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raet1dQ9JI58 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raet1dQ9JI58 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1dQ9JI58 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Raet1dQ9JI58 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1dQ9JI58 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Raet1dQ9JI58 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1dQ9JI58 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.29■□□□□ 0.52
Raet1dQ9JI58 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1dQ9JI58 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1dQ9JI58 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1dQ9JI58 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1dQ9JI58 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raet1dQ9JI58 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms