Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmn1r40Q9EQ46 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmn1r40Q9EQ46 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r40Q9EQ46 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vmn1r40Q9EQ46 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vmn1r40Q9EQ46 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vmn1r40Q9EQ46 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vmn1r40Q9EQ46 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Vmn1r40Q9EQ46 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.76■□□□□ 0.59
Vmn1r40Q9EQ46 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Vmn1r40Q9EQ46 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vmn1r40Q9EQ46 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
Vmn1r40Q9EQ46 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vmn1r40Q9EQ46 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vmn1r40Q9EQ46 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vmn1r40Q9EQ46 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vmn1r40Q9EQ46 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vmn1r40Q9EQ46 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vmn1r40Q9EQ46 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vmn1r40Q9EQ46 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vmn1r40Q9EQ46 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vmn1r40Q9EQ46 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vmn1r40Q9EQ46 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r40Q9EQ46 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.73■□□□□ 0.59
Vmn1r40Q9EQ46 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r40Q9EQ46 Gm42642-201ENSMUST00000200683 355 ntBASIC18.73■□□□□ 0.59
Vmn1r40Q9EQ46 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r40Q9EQ46 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r40Q9EQ46 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r40Q9EQ46 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r40Q9EQ46 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r40Q9EQ46 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r40Q9EQ46 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vmn1r40Q9EQ46 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vmn1r40Q9EQ46 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.72■□□□□ 0.59
Vmn1r40Q9EQ46 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.72■□□□□ 0.59
Vmn1r40Q9EQ46 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.72■□□□□ 0.59
Vmn1r40Q9EQ46 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.72■□□□□ 0.59
Vmn1r40Q9EQ46 Gm27801-201ENSMUST00000184174 223 ntBASIC18.72■□□□□ 0.59
Vmn1r40Q9EQ46 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vmn1r40Q9EQ46 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Vmn1r40Q9EQ46 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Vmn1r40Q9EQ46 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vmn1r40Q9EQ46 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r40Q9EQ46 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r40Q9EQ46 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r40Q9EQ46 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r40Q9EQ46 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms