Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hmgn3Q9DCB1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgn3Q9DCB1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgn3Q9DCB1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgn3Q9DCB1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgn3Q9DCB1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Hmgn3Q9DCB1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgn3Q9DCB1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgn3Q9DCB1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hmgn3Q9DCB1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Gm11175-201ENSMUST00000116172 543 ntBASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.57■□□□□ 0.56
Hmgn3Q9DCB1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Hmgn3Q9DCB1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.55■□□□□ 0.56
Hmgn3Q9DCB1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn3Q9DCB1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn3Q9DCB1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn3Q9DCB1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn3Q9DCB1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hmgn3Q9DCB1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn3Q9DCB1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn3Q9DCB1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn3Q9DCB1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn3Q9DCB1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn3Q9DCB1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn3Q9DCB1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn3Q9DCB1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn3Q9DCB1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn3Q9DCB1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.53■□□□□ 0.56
Hmgn3Q9DCB1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hmgn3Q9DCB1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn3Q9DCB1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn3Q9DCB1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.53■□□□□ 0.56
Hmgn3Q9DCB1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.53■□□□□ 0.56
Hmgn3Q9DCB1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn3Q9DCB1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Hmgn3Q9DCB1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn3Q9DCB1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn3Q9DCB1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn3Q9DCB1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn3Q9DCB1 Gm27502-201ENSMUST00000183495 199 ntBASIC18.52■□□□□ 0.56
Hmgn3Q9DCB1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn3Q9DCB1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Hmgn3Q9DCB1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Hmgn3Q9DCB1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hmgn3Q9DCB1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hmgn3Q9DCB1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.51■□□□□ 0.55
Hmgn3Q9DCB1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgn3Q9DCB1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Hmgn3Q9DCB1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Hmgn3Q9DCB1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgn3Q9DCB1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgn3Q9DCB1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Hmgn3Q9DCB1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hmgn3Q9DCB1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms