Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cir1Q9DA19 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cir1Q9DA19 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.09■□□□□ 0.33
Cir1Q9DA19 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cir1Q9DA19 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cir1Q9DA19 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cir1Q9DA19 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cir1Q9DA19 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cir1Q9DA19 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cir1Q9DA19 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cir1Q9DA19 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cir1Q9DA19 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.08■□□□□ 0.32
Cir1Q9DA19 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cir1Q9DA19 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cir1Q9DA19 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.08■□□□□ 0.32
Cir1Q9DA19 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Cir1Q9DA19 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cir1Q9DA19 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cir1Q9DA19 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.08■□□□□ 0.32
Cir1Q9DA19 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.07■□□□□ 0.32
Cir1Q9DA19 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cir1Q9DA19 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.06■□□□□ 0.32
Cir1Q9DA19 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.06■□□□□ 0.32
Cir1Q9DA19 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.06■□□□□ 0.32
Cir1Q9DA19 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cir1Q9DA19 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cir1Q9DA19 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cir1Q9DA19 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Cir1Q9DA19 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cir1Q9DA19 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cir1Q9DA19 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cir1Q9DA19 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cir1Q9DA19 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cir1Q9DA19 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cir1Q9DA19 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Gm7417-201ENSMUST00000192950 473 ntBASIC17.04■□□□□ 0.32
Cir1Q9DA19 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cir1Q9DA19 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cir1Q9DA19 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms