Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Echdc3Q9D7J9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Echdc3Q9D7J9 Gm5812-201ENSMUST00000061073 957 ntBASIC19.22■□□□□ 0.67
Echdc3Q9D7J9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Echdc3Q9D7J9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Echdc3Q9D7J9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Echdc3Q9D7J9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Echdc3Q9D7J9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Echdc3Q9D7J9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Echdc3Q9D7J9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Echdc3Q9D7J9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Echdc3Q9D7J9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Echdc3Q9D7J9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Echdc3Q9D7J9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Echdc3Q9D7J9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Echdc3Q9D7J9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Echdc3Q9D7J9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Echdc3Q9D7J9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Echdc3Q9D7J9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Echdc3Q9D7J9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Echdc3Q9D7J9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Echdc3Q9D7J9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.2■□□□□ 0.66
Echdc3Q9D7J9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Echdc3Q9D7J9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Echdc3Q9D7J9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.2■□□□□ 0.66
Echdc3Q9D7J9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Echdc3Q9D7J9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Echdc3Q9D7J9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Echdc3Q9D7J9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Echdc3Q9D7J9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Echdc3Q9D7J9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Echdc3Q9D7J9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Echdc3Q9D7J9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Echdc3Q9D7J9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Echdc3Q9D7J9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Echdc3Q9D7J9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Echdc3Q9D7J9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Echdc3Q9D7J9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Echdc3Q9D7J9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Echdc3Q9D7J9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Echdc3Q9D7J9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Echdc3Q9D7J9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Echdc3Q9D7J9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Echdc3Q9D7J9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Echdc3Q9D7J9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Echdc3Q9D7J9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Echdc3Q9D7J9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Echdc3Q9D7J9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Echdc3Q9D7J9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Echdc3Q9D7J9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Echdc3Q9D7J9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Echdc3Q9D7J9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.17■□□□□ 0.66
Echdc3Q9D7J9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Echdc3Q9D7J9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Echdc3Q9D7J9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Echdc3Q9D7J9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Echdc3Q9D7J9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Echdc3Q9D7J9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Echdc3Q9D7J9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Echdc3Q9D7J9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Echdc3Q9D7J9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Echdc3Q9D7J9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Echdc3Q9D7J9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Echdc3Q9D7J9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.15■□□□□ 0.66
Echdc3Q9D7J9 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.15■□□□□ 0.66
Echdc3Q9D7J9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.15■□□□□ 0.66
Echdc3Q9D7J9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Echdc3Q9D7J9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Echdc3Q9D7J9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Echdc3Q9D7J9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Echdc3Q9D7J9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Echdc3Q9D7J9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Echdc3Q9D7J9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Echdc3Q9D7J9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Echdc3Q9D7J9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.14■□□□□ 0.65
Echdc3Q9D7J9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.14■□□□□ 0.65
Echdc3Q9D7J9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Echdc3Q9D7J9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Echdc3Q9D7J9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.14■□□□□ 0.65
Echdc3Q9D7J9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.13■□□□□ 0.65
Echdc3Q9D7J9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Echdc3Q9D7J9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Echdc3Q9D7J9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Echdc3Q9D7J9 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.13■□□□□ 0.65
Echdc3Q9D7J9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Echdc3Q9D7J9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Echdc3Q9D7J9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Echdc3Q9D7J9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms