Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim42Q9D2H5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim42Q9D2H5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim42Q9D2H5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim42Q9D2H5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim42Q9D2H5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.69■□□□□ 0.74
Trim42Q9D2H5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim42Q9D2H5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Trim42Q9D2H5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim42Q9D2H5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim42Q9D2H5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Gm11175-201ENSMUST00000116172 543 ntBASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Gm7332-201ENSMUST00000118351 454 ntBASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim42Q9D2H5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim42Q9D2H5 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.67■□□□□ 0.74
Trim42Q9D2H5 Gm27502-201ENSMUST00000183495 199 ntBASIC19.67■□□□□ 0.74
Trim42Q9D2H5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim42Q9D2H5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim42Q9D2H5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim42Q9D2H5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim42Q9D2H5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim42Q9D2H5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim42Q9D2H5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim42Q9D2H5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim42Q9D2H5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim42Q9D2H5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim42Q9D2H5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim42Q9D2H5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim42Q9D2H5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim42Q9D2H5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
Trim42Q9D2H5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.64■□□□□ 0.73
Trim42Q9D2H5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim42Q9D2H5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim42Q9D2H5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim42Q9D2H5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim42Q9D2H5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim42Q9D2H5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim42Q9D2H5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim42Q9D2H5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim42Q9D2H5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim42Q9D2H5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim42Q9D2H5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim42Q9D2H5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim42Q9D2H5 Mir6538-201ENSMUST00000183713 110 ntBASIC19.62■□□□□ 0.73
Trim42Q9D2H5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim42Q9D2H5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim42Q9D2H5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms