Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1aQ9D132 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Upk1aQ9D132 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1aQ9D132 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1aQ9D132 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1aQ9D132 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1aQ9D132 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1aQ9D132 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1aQ9D132 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Upk1aQ9D132 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk1aQ9D132 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Upk1aQ9D132 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Upk1aQ9D132 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Upk1aQ9D132 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Upk1aQ9D132 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Upk1aQ9D132 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Upk1aQ9D132 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Upk1aQ9D132 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.83■□□□□ 0.61
Upk1aQ9D132 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Upk1aQ9D132 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.83■□□□□ 0.6
Upk1aQ9D132 Gm43566-201ENSMUST00000196851 808 ntBASIC18.83■□□□□ 0.6
Upk1aQ9D132 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Upk1aQ9D132 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk1aQ9D132 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk1aQ9D132 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Upk1aQ9D132 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.83■□□□□ 0.6
Upk1aQ9D132 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1aQ9D132 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1aQ9D132 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1aQ9D132 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.82■□□□□ 0.6
Upk1aQ9D132 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Upk1aQ9D132 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1aQ9D132 Gm5921-201ENSMUST00000075898 882 ntBASIC18.82■□□□□ 0.6
Upk1aQ9D132 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1aQ9D132 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1aQ9D132 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1aQ9D132 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk1aQ9D132 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Upk1aQ9D132 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1aQ9D132 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.81■□□□□ 0.6
Upk1aQ9D132 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1aQ9D132 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1aQ9D132 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1aQ9D132 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Upk1aQ9D132 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk1aQ9D132 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Upk1aQ9D132 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk1aQ9D132 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk1aQ9D132 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk1aQ9D132 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.8■□□□□ 0.6
Upk1aQ9D132 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Upk1aQ9D132 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.8■□□□□ 0.6
Upk1aQ9D132 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Upk1aQ9D132 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.8■□□□□ 0.6
Upk1aQ9D132 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.79■□□□□ 0.6
Upk1aQ9D132 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upk1aQ9D132 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Upk1aQ9D132 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Upk1aQ9D132 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upk1aQ9D132 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Upk1aQ9D132 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upk1aQ9D132 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upk1aQ9D132 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upk1aQ9D132 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Upk1aQ9D132 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
Upk1aQ9D132 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Upk1aQ9D132 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.78■□□□□ 0.6
Upk1aQ9D132 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upk1aQ9D132 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Upk1aQ9D132 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1aQ9D132 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1aQ9D132 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1aQ9D132 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.77■□□□□ 0.6
Upk1aQ9D132 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1aQ9D132 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1aQ9D132 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.77■□□□□ 0.6
Upk1aQ9D132 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Upk1aQ9D132 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1aQ9D132 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Upk1aQ9D132 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Upk1aQ9D132 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Upk1aQ9D132 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.77■□□□□ 0.59
Upk1aQ9D132 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Upk1aQ9D132 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upk1aQ9D132 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.76■□□□□ 0.59
Upk1aQ9D132 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upk1aQ9D132 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Upk1aQ9D132 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upk1aQ9D132 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upk1aQ9D132 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Upk1aQ9D132 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.75■□□□□ 0.59
Upk1aQ9D132 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upk1aQ9D132 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.75■□□□□ 0.59
Upk1aQ9D132 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upk1aQ9D132 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Upk1aQ9D132 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upk1aQ9D132 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upk1aQ9D132 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Upk1aQ9D132 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Upk1aQ9D132 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms