Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1eQ9CZQ6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Raet1eQ9CZQ6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1eQ9CZQ6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Raet1eQ9CZQ6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1eQ9CZQ6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1eQ9CZQ6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1eQ9CZQ6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Raet1eQ9CZQ6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Raet1eQ9CZQ6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Raet1eQ9CZQ6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1eQ9CZQ6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.4■□□□□ 0.38
Raet1eQ9CZQ6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1eQ9CZQ6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1eQ9CZQ6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Raet1eQ9CZQ6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Raet1eQ9CZQ6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Raet1eQ9CZQ6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1eQ9CZQ6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1eQ9CZQ6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1eQ9CZQ6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1eQ9CZQ6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Raet1eQ9CZQ6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Raet1eQ9CZQ6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1eQ9CZQ6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Raet1eQ9CZQ6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1eQ9CZQ6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1eQ9CZQ6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Raet1eQ9CZQ6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.37■□□□□ 0.37
Raet1eQ9CZQ6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Raet1eQ9CZQ6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1eQ9CZQ6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1eQ9CZQ6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1eQ9CZQ6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1eQ9CZQ6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1eQ9CZQ6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1eQ9CZQ6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1eQ9CZQ6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.37■□□□□ 0.37
Raet1eQ9CZQ6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1eQ9CZQ6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1eQ9CZQ6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1eQ9CZQ6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1eQ9CZQ6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1eQ9CZQ6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1eQ9CZQ6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1eQ9CZQ6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1eQ9CZQ6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.36■□□□□ 0.37
Raet1eQ9CZQ6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1eQ9CZQ6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Raet1eQ9CZQ6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1eQ9CZQ6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1eQ9CZQ6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1eQ9CZQ6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1eQ9CZQ6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1eQ9CZQ6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1eQ9CZQ6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1eQ9CZQ6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1eQ9CZQ6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Gm14523-201ENSMUST00000117260 558 ntBASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1eQ9CZQ6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raet1eQ9CZQ6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Raet1eQ9CZQ6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raet1eQ9CZQ6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raet1eQ9CZQ6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raet1eQ9CZQ6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1eQ9CZQ6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1eQ9CZQ6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1eQ9CZQ6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Raet1eQ9CZQ6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.33■□□□□ 0.36
Raet1eQ9CZQ6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1eQ9CZQ6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Raet1eQ9CZQ6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1eQ9CZQ6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms