Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Mir6236-201ENSMUST00000184437 123 ntBASIC19.73■□□□□ 0.75
Ssu72Q9CY97 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.73■□□□□ 0.75
Ssu72Q9CY97 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssu72Q9CY97 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssu72Q9CY97 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssu72Q9CY97 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ssu72Q9CY97 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ssu72Q9CY97 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ssu72Q9CY97 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssu72Q9CY97 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.72■□□□□ 0.75
Ssu72Q9CY97 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.72■□□□□ 0.75
Ssu72Q9CY97 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssu72Q9CY97 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ssu72Q9CY97 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.72■□□□□ 0.75
Ssu72Q9CY97 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssu72Q9CY97 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssu72Q9CY97 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssu72Q9CY97 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.71■□□□□ 0.75
Ssu72Q9CY97 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssu72Q9CY97 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ssu72Q9CY97 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssu72Q9CY97 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.71■□□□□ 0.75
Ssu72Q9CY97 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
Ssu72Q9CY97 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.71■□□□□ 0.75
Ssu72Q9CY97 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ssu72Q9CY97 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssu72Q9CY97 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Mir6538-201ENSMUST00000183713 110 ntBASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssu72Q9CY97 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.69■□□□□ 0.74
Ssu72Q9CY97 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ssu72Q9CY97 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssu72Q9CY97 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssu72Q9CY97 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ssu72Q9CY97 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Ssu72Q9CY97 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Ssu72Q9CY97 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssu72Q9CY97 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ssu72Q9CY97 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.69■□□□□ 0.74
Ssu72Q9CY97 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ssu72Q9CY97 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssu72Q9CY97 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ssu72Q9CY97 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssu72Q9CY97 Golph3-205ENSMUST00000228671 2842 ntBASIC19.68■□□□□ 0.74
Ssu72Q9CY97 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssu72Q9CY97 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.68■□□□□ 0.74
Ssu72Q9CY97 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.68■□□□□ 0.74
Ssu72Q9CY97 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssu72Q9CY97 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssu72Q9CY97 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssu72Q9CY97 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssu72Q9CY97 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ssu72Q9CY97 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssu72Q9CY97 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssu72Q9CY97 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssu72Q9CY97 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssu72Q9CY97 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssu72Q9CY97 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssu72Q9CY97 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssu72Q9CY97 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssu72Q9CY97 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ssu72Q9CY97 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ssu72Q9CY97 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssu72Q9CY97 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssu72Q9CY97 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssu72Q9CY97 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.66■□□□□ 0.74
Ssu72Q9CY97 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.66■□□□□ 0.74
Ssu72Q9CY97 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssu72Q9CY97 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ssu72Q9CY97 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.65■□□□□ 0.74
Ssu72Q9CY97 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssu72Q9CY97 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.65■□□□□ 0.74
Ssu72Q9CY97 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssu72Q9CY97 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ssu72Q9CY97 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssu72Q9CY97 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssu72Q9CY97 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ssu72Q9CY97 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssu72Q9CY97 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ssu72Q9CY97 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ssu72Q9CY97 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssu72Q9CY97 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssu72Q9CY97 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssu72Q9CY97 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssu72Q9CY97 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ssu72Q9CY97 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.63■□□□□ 0.73
Ssu72Q9CY97 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssu72Q9CY97 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.63■□□□□ 0.73
Ssu72Q9CY97 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms