Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
Chd1lQ9CXF7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chd1lQ9CXF7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chd1lQ9CXF7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Chd1lQ9CXF7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.38■■□□□ 1.17
Chd1lQ9CXF7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chd1lQ9CXF7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chd1lQ9CXF7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chd1lQ9CXF7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chd1lQ9CXF7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.37■■□□□ 1.17
Chd1lQ9CXF7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chd1lQ9CXF7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Chd1lQ9CXF7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Chd1lQ9CXF7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chd1lQ9CXF7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Chd1lQ9CXF7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Fam105a-203ENSMUST00000226170 3043 ntBASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Chd1lQ9CXF7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
Chd1lQ9CXF7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.35■■□□□ 1.17
Chd1lQ9CXF7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Chd1lQ9CXF7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chd1lQ9CXF7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.34■■□□□ 1.17
Chd1lQ9CXF7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Chd1lQ9CXF7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chd1lQ9CXF7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
Chd1lQ9CXF7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Chd1lQ9CXF7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Chd1lQ9CXF7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chd1lQ9CXF7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chd1lQ9CXF7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Chd1lQ9CXF7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Chd1lQ9CXF7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Chd1lQ9CXF7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Chd1lQ9CXF7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Chd1lQ9CXF7 Gm11175-201ENSMUST00000116172 543 ntBASIC22.33■■□□□ 1.17
Chd1lQ9CXF7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Chd1lQ9CXF7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.33■■□□□ 1.17
Chd1lQ9CXF7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Chd1lQ9CXF7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Chd1lQ9CXF7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Chd1lQ9CXF7 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.32■■□□□ 1.16
Chd1lQ9CXF7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC22.32■■□□□ 1.16
Chd1lQ9CXF7 Gm10420-201ENSMUST00000121713 882 ntBASIC22.32■■□□□ 1.16
Chd1lQ9CXF7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Chd1lQ9CXF7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Chd1lQ9CXF7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Chd1lQ9CXF7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Chd1lQ9CXF7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Chd1lQ9CXF7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chd1lQ9CXF7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Chd1lQ9CXF7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Chd1lQ9CXF7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Chd1lQ9CXF7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Chd1lQ9CXF7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Chd1lQ9CXF7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Chd1lQ9CXF7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd1lQ9CXF7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd1lQ9CXF7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Chd1lQ9CXF7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd1lQ9CXF7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Chd1lQ9CXF7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Chd1lQ9CXF7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
Chd1lQ9CXF7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chd1lQ9CXF7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Chd1lQ9CXF7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Chd1lQ9CXF7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Chd1lQ9CXF7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Chd1lQ9CXF7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Chd1lQ9CXF7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.28■■□□□ 1.16
Chd1lQ9CXF7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
Chd1lQ9CXF7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Chd1lQ9CXF7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Chd1lQ9CXF7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Chd1lQ9CXF7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms