Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx47Q9CWX9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ddx47Q9CWX9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx47Q9CWX9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ddx47Q9CWX9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx47Q9CWX9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx47Q9CWX9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.36■□□□□ 0.85
Ddx47Q9CWX9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx47Q9CWX9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx47Q9CWX9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx47Q9CWX9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx47Q9CWX9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx47Q9CWX9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx47Q9CWX9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx47Q9CWX9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx47Q9CWX9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx47Q9CWX9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx47Q9CWX9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx47Q9CWX9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx47Q9CWX9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx47Q9CWX9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx47Q9CWX9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx47Q9CWX9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx47Q9CWX9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ddx47Q9CWX9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ddx47Q9CWX9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx47Q9CWX9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx47Q9CWX9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx47Q9CWX9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx47Q9CWX9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ddx47Q9CWX9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx47Q9CWX9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx47Q9CWX9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx47Q9CWX9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Ddx47Q9CWX9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx47Q9CWX9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx47Q9CWX9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx47Q9CWX9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.33■□□□□ 0.85
Ddx47Q9CWX9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ddx47Q9CWX9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx47Q9CWX9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx47Q9CWX9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx47Q9CWX9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx47Q9CWX9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx47Q9CWX9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Ddx47Q9CWX9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx47Q9CWX9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx47Q9CWX9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.32■□□□□ 0.84
Ddx47Q9CWX9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.32■□□□□ 0.84
Ddx47Q9CWX9 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.32■□□□□ 0.84
Ddx47Q9CWX9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ddx47Q9CWX9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx47Q9CWX9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx47Q9CWX9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx47Q9CWX9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx47Q9CWX9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx47Q9CWX9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx47Q9CWX9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx47Q9CWX9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ddx47Q9CWX9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx47Q9CWX9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx47Q9CWX9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx47Q9CWX9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx47Q9CWX9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ddx47Q9CWX9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx47Q9CWX9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx47Q9CWX9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx47Q9CWX9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx47Q9CWX9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.3■□□□□ 0.84
Ddx47Q9CWX9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ddx47Q9CWX9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx47Q9CWX9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx47Q9CWX9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx47Q9CWX9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx47Q9CWX9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx47Q9CWX9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx47Q9CWX9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx47Q9CWX9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx47Q9CWX9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms