Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf135Q9CWS1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rnf135Q9CWS1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.61■□□□□ 0.89
Rnf135Q9CWS1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Rnf135Q9CWS1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf135Q9CWS1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf135Q9CWS1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf135Q9CWS1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf135Q9CWS1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf135Q9CWS1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf135Q9CWS1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf135Q9CWS1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf135Q9CWS1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Rnf135Q9CWS1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rnf135Q9CWS1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rnf135Q9CWS1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf135Q9CWS1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf135Q9CWS1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf135Q9CWS1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rnf135Q9CWS1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.59■□□□□ 0.89
Rnf135Q9CWS1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf135Q9CWS1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf135Q9CWS1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.59■□□□□ 0.89
Rnf135Q9CWS1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf135Q9CWS1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf135Q9CWS1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf135Q9CWS1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf135Q9CWS1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf135Q9CWS1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rnf135Q9CWS1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf135Q9CWS1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rnf135Q9CWS1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Rnf135Q9CWS1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Gm12922-201ENSMUST00000120626 809 ntBASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf135Q9CWS1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf135Q9CWS1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.56■□□□□ 0.88
Rnf135Q9CWS1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf135Q9CWS1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf135Q9CWS1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf135Q9CWS1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf135Q9CWS1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf135Q9CWS1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf135Q9CWS1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf135Q9CWS1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf135Q9CWS1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf135Q9CWS1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf135Q9CWS1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf135Q9CWS1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf135Q9CWS1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rnf135Q9CWS1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Rnf135Q9CWS1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf135Q9CWS1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf135Q9CWS1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf135Q9CWS1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.53■□□□□ 0.88
Rnf135Q9CWS1 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.53■□□□□ 0.88
Rnf135Q9CWS1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.53■□□□□ 0.88
Rnf135Q9CWS1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Rnf135Q9CWS1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf135Q9CWS1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf135Q9CWS1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf135Q9CWS1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf135Q9CWS1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf135Q9CWS1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms