Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim34aQ99PP6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Trim34aQ99PP6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Trim34aQ99PP6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC24.59■■□□□ 1.53
Trim34aQ99PP6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Trim34aQ99PP6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC24.59■■□□□ 1.53
Trim34aQ99PP6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim34aQ99PP6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim34aQ99PP6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim34aQ99PP6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim34aQ99PP6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim34aQ99PP6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim34aQ99PP6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Trim34aQ99PP6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trim34aQ99PP6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC24.58■■□□□ 1.53
Trim34aQ99PP6 AC112142.1-201ENSMUST00000228796 918 ntBASIC24.58■■□□□ 1.53
Trim34aQ99PP6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Trim34aQ99PP6 Gm10602-201ENSMUST00000098239 609 ntBASIC24.58■■□□□ 1.53
Trim34aQ99PP6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trim34aQ99PP6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Trim34aQ99PP6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Trim34aQ99PP6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Trim34aQ99PP6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trim34aQ99PP6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Trim34aQ99PP6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Trim34aQ99PP6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC24.57■■□□□ 1.52
Trim34aQ99PP6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trim34aQ99PP6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trim34aQ99PP6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim34aQ99PP6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Trim34aQ99PP6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim34aQ99PP6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Trim34aQ99PP6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Trim34aQ99PP6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim34aQ99PP6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim34aQ99PP6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Trim34aQ99PP6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim34aQ99PP6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim34aQ99PP6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim34aQ99PP6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim34aQ99PP6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trim34aQ99PP6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trim34aQ99PP6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trim34aQ99PP6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Trim34aQ99PP6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC24.54■■□□□ 1.52
Trim34aQ99PP6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trim34aQ99PP6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trim34aQ99PP6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trim34aQ99PP6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim34aQ99PP6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
Trim34aQ99PP6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Trim34aQ99PP6 Gm12933-201ENSMUST00000120203 872 ntBASIC24.53■■□□□ 1.52
Trim34aQ99PP6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Trim34aQ99PP6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim34aQ99PP6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim34aQ99PP6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim34aQ99PP6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Trim34aQ99PP6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim34aQ99PP6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC24.52■■□□□ 1.52
Trim34aQ99PP6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC24.52■■□□□ 1.52
Trim34aQ99PP6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim34aQ99PP6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Trim34aQ99PP6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim34aQ99PP6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Trim34aQ99PP6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Trim34aQ99PP6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim34aQ99PP6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim34aQ99PP6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim34aQ99PP6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Trim34aQ99PP6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Trim34aQ99PP6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim34aQ99PP6 Gm27011-201ENSMUST00000182352 972 ntBASIC24.49■■□□□ 1.51
Trim34aQ99PP6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim34aQ99PP6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trim34aQ99PP6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trim34aQ99PP6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Trim34aQ99PP6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC24.48■■□□□ 1.51
Trim34aQ99PP6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
Trim34aQ99PP6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Trim34aQ99PP6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trim34aQ99PP6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Trim34aQ99PP6 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.47■■□□□ 1.51
Trim34aQ99PP6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim34aQ99PP6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim34aQ99PP6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Trim34aQ99PP6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC24.47■■□□□ 1.51
Trim34aQ99PP6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Trim34aQ99PP6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC24.47■■□□□ 1.51
Trim34aQ99PP6 Gm7514-201ENSMUST00000209475 934 ntBASIC24.47■■□□□ 1.51
Trim34aQ99PP6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Trim34aQ99PP6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Trim34aQ99PP6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim34aQ99PP6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim34aQ99PP6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim34aQ99PP6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim34aQ99PP6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim34aQ99PP6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Trim34aQ99PP6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC24.46■■□□□ 1.51
Trim34aQ99PP6 Ap3s1-204ENSMUST00000225520 957 ntBASIC24.46■■□□□ 1.51
Trim34aQ99PP6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms