Protein–RNA interactions for Protein: Q99MR9

Ppp1r3a, Protein phosphatase 1 regulatory subunit 3A, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3aQ99MR9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3aQ99MR9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3aQ99MR9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3aQ99MR9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3aQ99MR9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3aQ99MR9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3aQ99MR9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3aQ99MR9 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.51■■□□□ 1.03
Ppp1r3aQ99MR9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3aQ99MR9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3aQ99MR9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.51■■□□□ 1.03
Ppp1r3aQ99MR9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Ppp1r3aQ99MR9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3aQ99MR9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Ppp1r3aQ99MR9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3aQ99MR9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3aQ99MR9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ppp1r3aQ99MR9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp1r3aQ99MR9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ppp1r3aQ99MR9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp1r3aQ99MR9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp1r3aQ99MR9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ppp1r3aQ99MR9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp1r3aQ99MR9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ppp1r3aQ99MR9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp1r3aQ99MR9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp1r3aQ99MR9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp1r3aQ99MR9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp1r3aQ99MR9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.48■■□□□ 1.03
Ppp1r3aQ99MR9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.47■■□□□ 1.03
Ppp1r3aQ99MR9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3aQ99MR9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Ppp1r3aQ99MR9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3aQ99MR9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3aQ99MR9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3aQ99MR9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp1r3aQ99MR9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.44■■□□□ 1.02
Ppp1r3aQ99MR9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ppp1r3aQ99MR9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ppp1r3aQ99MR9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ppp1r3aQ99MR9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ppp1r3aQ99MR9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ppp1r3aQ99MR9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ppp1r3aQ99MR9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ppp1r3aQ99MR9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms