Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd3Q99LE3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd3Q99LE3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd3Q99LE3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd3Q99LE3 Smad6-203ENSMUST00000179458 273 ntBASIC20.59■□□□□ 0.89
Lysmd3Q99LE3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd3Q99LE3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
Lysmd3Q99LE3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.59■□□□□ 0.89
Lysmd3Q99LE3 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.59■□□□□ 0.89
Lysmd3Q99LE3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd3Q99LE3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd3Q99LE3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd3Q99LE3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd3Q99LE3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd3Q99LE3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.58■□□□□ 0.89
Lysmd3Q99LE3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd3Q99LE3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.58■□□□□ 0.89
Lysmd3Q99LE3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lysmd3Q99LE3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd3Q99LE3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lysmd3Q99LE3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.58■□□□□ 0.88
Lysmd3Q99LE3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Lysmd3Q99LE3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.58■□□□□ 0.88
Lysmd3Q99LE3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Gm40848-201ENSMUST00000221998 324 ntBASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd3Q99LE3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.56■□□□□ 0.88
Lysmd3Q99LE3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd3Q99LE3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd3Q99LE3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.56■□□□□ 0.88
Lysmd3Q99LE3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd3Q99LE3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.56■□□□□ 0.88
Lysmd3Q99LE3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd3Q99LE3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.56■□□□□ 0.88
Lysmd3Q99LE3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd3Q99LE3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd3Q99LE3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd3Q99LE3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd3Q99LE3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd3Q99LE3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Lysmd3Q99LE3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.55■□□□□ 0.88
Lysmd3Q99LE3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd3Q99LE3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd3Q99LE3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd3Q99LE3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd3Q99LE3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Lysmd3Q99LE3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd3Q99LE3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd3Q99LE3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd3Q99LE3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd3Q99LE3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd3Q99LE3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd3Q99LE3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd3Q99LE3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Lysmd3Q99LE3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd3Q99LE3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Lysmd3Q99LE3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd3Q99LE3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd3Q99LE3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Lysmd3Q99LE3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd3Q99LE3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd3Q99LE3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd3Q99LE3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd3Q99LE3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd3Q99LE3 Gm43060-201ENSMUST00000200621 289 ntBASIC20.52■□□□□ 0.88
Lysmd3Q99LE3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd3Q99LE3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd3Q99LE3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Lysmd3Q99LE3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd3Q99LE3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Lysmd3Q99LE3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lysmd3Q99LE3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lysmd3Q99LE3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Lysmd3Q99LE3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.51■□□□□ 0.87
Lysmd3Q99LE3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms