Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cstf1Q99LC2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cstf1Q99LC2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cstf1Q99LC2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cstf1Q99LC2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cstf1Q99LC2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cstf1Q99LC2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.83■□□□□ 0.77
Cstf1Q99LC2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.83■□□□□ 0.77
Cstf1Q99LC2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cstf1Q99LC2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cstf1Q99LC2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.83■□□□□ 0.77
Cstf1Q99LC2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cstf1Q99LC2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Cstf1Q99LC2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cstf1Q99LC2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cstf1Q99LC2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cstf1Q99LC2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cstf1Q99LC2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cstf1Q99LC2 Mir5133-201ENSMUST00000174955 77 ntBASIC19.82■□□□□ 0.76
Cstf1Q99LC2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cstf1Q99LC2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.82■□□□□ 0.76
Cstf1Q99LC2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cstf1Q99LC2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cstf1Q99LC2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cstf1Q99LC2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cstf1Q99LC2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.82■□□□□ 0.76
Cstf1Q99LC2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cstf1Q99LC2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.8■□□□□ 0.76
Cstf1Q99LC2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cstf1Q99LC2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cstf1Q99LC2 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.8■□□□□ 0.76
Cstf1Q99LC2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cstf1Q99LC2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cstf1Q99LC2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cstf1Q99LC2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cstf1Q99LC2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cstf1Q99LC2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.79■□□□□ 0.76
Cstf1Q99LC2 Gm10252-201ENSMUST00000209541 832 ntBASIC19.79■□□□□ 0.76
Cstf1Q99LC2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cstf1Q99LC2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cstf1Q99LC2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.79■□□□□ 0.76
Cstf1Q99LC2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cstf1Q99LC2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cstf1Q99LC2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cstf1Q99LC2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.78■□□□□ 0.76
Cstf1Q99LC2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.78■□□□□ 0.76
Cstf1Q99LC2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cstf1Q99LC2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cstf1Q99LC2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cstf1Q99LC2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cstf1Q99LC2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cstf1Q99LC2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Cstf1Q99LC2 Gm20760-201ENSMUST00000179197 648 ntBASIC19.77■□□□□ 0.76
Cstf1Q99LC2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Cstf1Q99LC2 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.77■□□□□ 0.76
Cstf1Q99LC2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cstf1Q99LC2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cstf1Q99LC2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.77■□□□□ 0.75
Cstf1Q99LC2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cstf1Q99LC2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cstf1Q99LC2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cstf1Q99LC2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cstf1Q99LC2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cstf1Q99LC2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cstf1Q99LC2 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.76■□□□□ 0.75
Cstf1Q99LC2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cstf1Q99LC2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cstf1Q99LC2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cstf1Q99LC2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cstf1Q99LC2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cstf1Q99LC2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cstf1Q99LC2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cstf1Q99LC2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cstf1Q99LC2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cstf1Q99LC2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cstf1Q99LC2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cstf1Q99LC2 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.75■□□□□ 0.75
Cstf1Q99LC2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Cstf1Q99LC2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cstf1Q99LC2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cstf1Q99LC2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cstf1Q99LC2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.74■□□□□ 0.75
Cstf1Q99LC2 Gm4968-201ENSMUST00000071458 858 ntBASIC19.74■□□□□ 0.75
Cstf1Q99LC2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cstf1Q99LC2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms