Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Smarcd2Q99JR8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcd2Q99JR8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Smarcd2Q99JR8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcd2Q99JR8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcd2Q99JR8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcd2Q99JR8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcd2Q99JR8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.15■□□□□ 0.82
Smarcd2Q99JR8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcd2Q99JR8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcd2Q99JR8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcd2Q99JR8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcd2Q99JR8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcd2Q99JR8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Smarcd2Q99JR8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcd2Q99JR8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.13■□□□□ 0.81
Smarcd2Q99JR8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.13■□□□□ 0.81
Smarcd2Q99JR8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcd2Q99JR8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Smarcd2Q99JR8 Gm7514-201ENSMUST00000209475 934 ntBASIC20.13■□□□□ 0.81
Smarcd2Q99JR8 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.13■□□□□ 0.81
Smarcd2Q99JR8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Smarcd2Q99JR8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Smarcd2Q99JR8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcd2Q99JR8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcd2Q99JR8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcd2Q99JR8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.12■□□□□ 0.81
Smarcd2Q99JR8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcd2Q99JR8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcd2Q99JR8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcd2Q99JR8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcd2Q99JR8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Smarcd2Q99JR8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcd2Q99JR8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
Smarcd2Q99JR8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcd2Q99JR8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Smarcd2Q99JR8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Smarcd2Q99JR8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Smarcd2Q99JR8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.1■□□□□ 0.81
Smarcd2Q99JR8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.1■□□□□ 0.81
Smarcd2Q99JR8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Smarcd2Q99JR8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcd2Q99JR8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcd2Q99JR8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd2Q99JR8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd2Q99JR8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Smarcd2Q99JR8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd2Q99JR8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Smarcd2Q99JR8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Smarcd2Q99JR8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.09■□□□□ 0.81
Smarcd2Q99JR8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd2Q99JR8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Smarcd2Q99JR8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcd2Q99JR8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smarcd2Q99JR8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Smarcd2Q99JR8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.08■□□□□ 0.81
Smarcd2Q99JR8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Smarcd2Q99JR8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smarcd2Q99JR8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.08■□□□□ 0.8
Smarcd2Q99JR8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smarcd2Q99JR8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smarcd2Q99JR8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.07■□□□□ 0.8
Smarcd2Q99JR8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcd2Q99JR8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcd2Q99JR8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.07■□□□□ 0.8
Smarcd2Q99JR8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.07■□□□□ 0.8
Smarcd2Q99JR8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcd2Q99JR8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcd2Q99JR8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Smarcd2Q99JR8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Smarcd2Q99JR8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcd2Q99JR8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd2Q99JR8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd2Q99JR8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd2Q99JR8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd2Q99JR8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Smarcd2Q99JR8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd2Q99JR8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd2Q99JR8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd2Q99JR8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd2Q99JR8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd2Q99JR8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd2Q99JR8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd2Q99JR8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd2Q99JR8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd2Q99JR8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd2Q99JR8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd2Q99JR8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms