Protein–RNA interactions for Protein: Q99JB6

Foxp3, Forkhead box protein P3, mousemouse

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxp3Q99JB6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Foxp3Q99JB6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxp3Q99JB6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxp3Q99JB6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Foxp3Q99JB6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxp3Q99JB6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Foxp3Q99JB6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxp3Q99JB6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxp3Q99JB6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Foxp3Q99JB6 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.05■□□□□ 0.8
Foxp3Q99JB6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.05■□□□□ 0.8
Foxp3Q99JB6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Foxp3Q99JB6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Foxp3Q99JB6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxp3Q99JB6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxp3Q99JB6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Foxp3Q99JB6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxp3Q99JB6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Foxp3Q99JB6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Foxp3Q99JB6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.04■□□□□ 0.8
Foxp3Q99JB6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxp3Q99JB6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Foxp3Q99JB6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Foxp3Q99JB6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxp3Q99JB6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Foxp3Q99JB6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxp3Q99JB6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxp3Q99JB6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.02■□□□□ 0.8
Foxp3Q99JB6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Foxp3Q99JB6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Foxp3Q99JB6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxp3Q99JB6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxp3Q99JB6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Foxp3Q99JB6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxp3Q99JB6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Foxp3Q99JB6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxp3Q99JB6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.01■□□□□ 0.79
Foxp3Q99JB6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.01■□□□□ 0.79
Foxp3Q99JB6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxp3Q99JB6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxp3Q99JB6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Foxp3Q99JB6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxp3Q99JB6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxp3Q99JB6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Foxp3Q99JB6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Foxp3Q99JB6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxp3Q99JB6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Foxp3Q99JB6 Gm7143-201ENSMUST00000222811 859 ntBASIC20■□□□□ 0.79
Foxp3Q99JB6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20■□□□□ 0.79
Foxp3Q99JB6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxp3Q99JB6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Foxp3Q99JB6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Foxp3Q99JB6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Foxp3Q99JB6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20■□□□□ 0.79
Foxp3Q99JB6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Gm12366-201ENSMUST00000121722 873 ntBASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Gm5786-201ENSMUST00000085368 882 ntBASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Foxp3Q99JB6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Gm10399-202ENSMUST00000202768 748 ntBASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Foxp3Q99JB6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Foxp3Q99JB6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms