Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prdm9Q96EQ9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prdm9Q96EQ9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Prdm9Q96EQ9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.57■□□□□ 0.72
Prdm9Q96EQ9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.57■□□□□ 0.72
Prdm9Q96EQ9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prdm9Q96EQ9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Prdm9Q96EQ9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prdm9Q96EQ9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prdm9Q96EQ9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Prdm9Q96EQ9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prdm9Q96EQ9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prdm9Q96EQ9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prdm9Q96EQ9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prdm9Q96EQ9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Prdm9Q96EQ9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prdm9Q96EQ9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Prdm9Q96EQ9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.56■□□□□ 0.72
Prdm9Q96EQ9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prdm9Q96EQ9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Prdm9Q96EQ9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.55■□□□□ 0.72
Prdm9Q96EQ9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Prdm9Q96EQ9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prdm9Q96EQ9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.55■□□□□ 0.72
Prdm9Q96EQ9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prdm9Q96EQ9 Gm8495-201ENSMUST00000188740 694 ntBASIC19.55■□□□□ 0.72
Prdm9Q96EQ9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prdm9Q96EQ9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prdm9Q96EQ9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prdm9Q96EQ9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Prdm9Q96EQ9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prdm9Q96EQ9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prdm9Q96EQ9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prdm9Q96EQ9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Prdm9Q96EQ9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prdm9Q96EQ9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Prdm9Q96EQ9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Prdm9Q96EQ9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Prdm9Q96EQ9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Prdm9Q96EQ9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prdm9Q96EQ9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Prdm9Q96EQ9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.53■□□□□ 0.72
Prdm9Q96EQ9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.53■□□□□ 0.72
Prdm9Q96EQ9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Prdm9Q96EQ9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prdm9Q96EQ9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prdm9Q96EQ9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Prdm9Q96EQ9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prdm9Q96EQ9 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.52■□□□□ 0.72
Prdm9Q96EQ9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prdm9Q96EQ9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.52■□□□□ 0.72
Prdm9Q96EQ9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.52■□□□□ 0.72
Prdm9Q96EQ9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.52■□□□□ 0.72
Prdm9Q96EQ9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Prdm9Q96EQ9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.51■□□□□ 0.71
Prdm9Q96EQ9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Prdm9Q96EQ9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prdm9Q96EQ9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Prdm9Q96EQ9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Prdm9Q96EQ9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.51■□□□□ 0.71
Prdm9Q96EQ9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Prdm9Q96EQ9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prdm9Q96EQ9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.5■□□□□ 0.71
Prdm9Q96EQ9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prdm9Q96EQ9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prdm9Q96EQ9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.5■□□□□ 0.71
Prdm9Q96EQ9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prdm9Q96EQ9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prdm9Q96EQ9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Prdm9Q96EQ9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prdm9Q96EQ9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.5■□□□□ 0.71
Prdm9Q96EQ9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prdm9Q96EQ9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prdm9Q96EQ9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.49■□□□□ 0.71
Prdm9Q96EQ9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prdm9Q96EQ9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prdm9Q96EQ9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prdm9Q96EQ9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prdm9Q96EQ9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prdm9Q96EQ9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Prdm9Q96EQ9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prdm9Q96EQ9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prdm9Q96EQ9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prdm9Q96EQ9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prdm9Q96EQ9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.48■□□□□ 0.71
Prdm9Q96EQ9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prdm9Q96EQ9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.48■□□□□ 0.71
Prdm9Q96EQ9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Prdm9Q96EQ9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prdm9Q96EQ9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Prdm9Q96EQ9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prdm9Q96EQ9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Prdm9Q96EQ9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prdm9Q96EQ9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.47■□□□□ 0.71
Prdm9Q96EQ9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prdm9Q96EQ9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Prdm9Q96EQ9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Prdm9Q96EQ9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prdm9Q96EQ9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prdm9Q96EQ9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms