Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha11Q91Y19 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha11Q91Y19 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha11Q91Y19 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha11Q91Y19 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha11Q91Y19 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha11Q91Y19 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha11Q91Y19 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha11Q91Y19 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha11Q91Y19 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.87■□□□□ 0.93
Pcdha11Q91Y19 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha11Q91Y19 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha11Q91Y19 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha11Q91Y19 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha11Q91Y19 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha11Q91Y19 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha11Q91Y19 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Pcdha11Q91Y19 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.86■□□□□ 0.93
Pcdha11Q91Y19 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha11Q91Y19 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha11Q91Y19 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha11Q91Y19 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pcdha11Q91Y19 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha11Q91Y19 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha11Q91Y19 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha11Q91Y19 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
Pcdha11Q91Y19 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha11Q91Y19 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha11Q91Y19 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Pcdha11Q91Y19 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdha11Q91Y19 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha11Q91Y19 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha11Q91Y19 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha11Q91Y19 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Pcdha11Q91Y19 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.83■□□□□ 0.93
Pcdha11Q91Y19 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pcdha11Q91Y19 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha11Q91Y19 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha11Q91Y19 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha11Q91Y19 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
Pcdha11Q91Y19 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.83■□□□□ 0.93
Pcdha11Q91Y19 Gm26833-201ENSMUST00000180899 440 ntBASIC20.83■□□□□ 0.93
Pcdha11Q91Y19 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pcdha11Q91Y19 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha11Q91Y19 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha11Q91Y19 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdha11Q91Y19 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha11Q91Y19 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha11Q91Y19 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha11Q91Y19 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.81■□□□□ 0.92
Pcdha11Q91Y19 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha11Q91Y19 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Pcdha11Q91Y19 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Pcdha11Q91Y19 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha11Q91Y19 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 Smad6-203ENSMUST00000179458 273 ntBASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdha11Q91Y19 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha11Q91Y19 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.79■□□□□ 0.92
Pcdha11Q91Y19 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.79■□□□□ 0.92
Pcdha11Q91Y19 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pcdha11Q91Y19 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha11Q91Y19 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha11Q91Y19 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha11Q91Y19 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha11Q91Y19 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha11Q91Y19 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Pcdha11Q91Y19 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha11Q91Y19 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha11Q91Y19 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha11Q91Y19 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdha11Q91Y19 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Pcdha11Q91Y19 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms