Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha9Q91Y11 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.15■□□□□ 0.98
Pcdha9Q91Y11 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha9Q91Y11 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha9Q91Y11 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Pcdha9Q91Y11 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Pcdha9Q91Y11 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha9Q91Y11 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha9Q91Y11 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha9Q91Y11 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.14■□□□□ 0.97
Pcdha9Q91Y11 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Pcdha9Q91Y11 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha9Q91Y11 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha9Q91Y11 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha9Q91Y11 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha9Q91Y11 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha9Q91Y11 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 Spcs1-204ENSMUST00000226782 949 ntBASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdha9Q91Y11 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Pcdha9Q91Y11 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdha9Q91Y11 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha9Q91Y11 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdha9Q91Y11 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdha9Q91Y11 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha9Q91Y11 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha9Q91Y11 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha9Q91Y11 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha9Q91Y11 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha9Q91Y11 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha9Q91Y11 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.11■□□□□ 0.97
Pcdha9Q91Y11 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.11■□□□□ 0.97
Pcdha9Q91Y11 Mir7075-201ENSMUST00000184187 82 ntBASIC21.11■□□□□ 0.97
Pcdha9Q91Y11 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha9Q91Y11 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Pcdha9Q91Y11 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pcdha9Q91Y11 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha9Q91Y11 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha9Q91Y11 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Pcdha9Q91Y11 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha9Q91Y11 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha9Q91Y11 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha9Q91Y11 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha9Q91Y11 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha9Q91Y11 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha9Q91Y11 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Gm12251-201ENSMUST00000117893 792 ntBASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Gm45417-201ENSMUST00000209533 758 ntBASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha9Q91Y11 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdha9Q91Y11 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdha9Q91Y11 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms