Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb3Q91XZ7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb3Q91XZ7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb3Q91XZ7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb3Q91XZ7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb3Q91XZ7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb3Q91XZ7 Gm10232-201ENSMUST00000089221 720 ntBASIC19.69■□□□□ 0.74
Pcdhb3Q91XZ7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb3Q91XZ7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb3Q91XZ7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb3Q91XZ7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb3Q91XZ7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb3Q91XZ7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb3Q91XZ7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhb3Q91XZ7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.66■□□□□ 0.74
Pcdhb3Q91XZ7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb3Q91XZ7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb3Q91XZ7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb3Q91XZ7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb3Q91XZ7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb3Q91XZ7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb3Q91XZ7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb3Q91XZ7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb3Q91XZ7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb3Q91XZ7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb3Q91XZ7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb3Q91XZ7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb3Q91XZ7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb3Q91XZ7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.64■□□□□ 0.74
Pcdhb3Q91XZ7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb3Q91XZ7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhb3Q91XZ7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhb3Q91XZ7 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.64■□□□□ 0.73
Pcdhb3Q91XZ7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb3Q91XZ7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb3Q91XZ7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb3Q91XZ7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb3Q91XZ7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb3Q91XZ7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms