Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga3Q91XY5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga3Q91XY5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.55■□□□□ 0.4
Pcdhga3Q91XY5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga3Q91XY5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga3Q91XY5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga3Q91XY5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhga3Q91XY5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga3Q91XY5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga3Q91XY5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga3Q91XY5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga3Q91XY5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga3Q91XY5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga3Q91XY5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdhga3Q91XY5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga3Q91XY5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga3Q91XY5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga3Q91XY5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga3Q91XY5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga3Q91XY5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga3Q91XY5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga3Q91XY5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga3Q91XY5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga3Q91XY5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Pcdhga3Q91XY5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga3Q91XY5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.52■□□□□ 0.4
Pcdhga3Q91XY5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga3Q91XY5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga3Q91XY5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
Pcdhga3Q91XY5 Gm43530-201ENSMUST00000195920 274 ntBASIC17.52■□□□□ 0.4
Pcdhga3Q91XY5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga3Q91XY5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga3Q91XY5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Pcdhga3Q91XY5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga3Q91XY5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga3Q91XY5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga3Q91XY5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga3Q91XY5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga3Q91XY5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga3Q91XY5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms