Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga4Q91XY4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhga4Q91XY4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga4Q91XY4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Gm43137-201ENSMUST00000198052 594 ntBASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Gm45417-201ENSMUST00000209533 758 ntBASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga4Q91XY4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Golph3-202ENSMUST00000226517 2359 ntBASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga4Q91XY4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdhga4Q91XY4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhga4Q91XY4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pcdhga4Q91XY4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga4Q91XY4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga4Q91XY4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhga4Q91XY4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga4Q91XY4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga4Q91XY4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga4Q91XY4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga4Q91XY4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.32■□□□□ 0.68
Pcdhga4Q91XY4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga4Q91XY4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga4Q91XY4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga4Q91XY4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga4Q91XY4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga4Q91XY4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga4Q91XY4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
Pcdhga4Q91XY4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
Pcdhga4Q91XY4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga4Q91XY4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhga4Q91XY4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga4Q91XY4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhga4Q91XY4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga4Q91XY4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga4Q91XY4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga4Q91XY4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga4Q91XY4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga4Q91XY4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga4Q91XY4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga4Q91XY4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga4Q91XY4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga4Q91XY4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhga4Q91XY4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdhga4Q91XY4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhga4Q91XY4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdhga4Q91XY4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhga4Q91XY4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga4Q91XY4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhga4Q91XY4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga4Q91XY4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms