Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb2Q91XX7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb2Q91XX7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgb2Q91XX7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb2Q91XX7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb2Q91XX7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Pcdhgb2Q91XX7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb2Q91XX7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb2Q91XX7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgb2Q91XX7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhgb2Q91XX7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.58■□□□□ 0.56
Pcdhgb2Q91XX7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhgb2Q91XX7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb2Q91XX7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhgb2Q91XX7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb2Q91XX7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhgb2Q91XX7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb2Q91XX7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb2Q91XX7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgb2Q91XX7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Gm7143-201ENSMUST00000222811 859 ntBASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgb2Q91XX7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhgb2Q91XX7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhgb2Q91XX7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb2Q91XX7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb2Q91XX7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb2Q91XX7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdhgb2Q91XX7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdhgb2Q91XX7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhgb2Q91XX7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb2Q91XX7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb2Q91XX7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhgb2Q91XX7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb2Q91XX7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb2Q91XX7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhgb2Q91XX7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb2Q91XX7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhgb2Q91XX7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb2Q91XX7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhgb2Q91XX7 Gm43566-201ENSMUST00000196851 808 ntBASIC18.55■□□□□ 0.56
Pcdhgb2Q91XX7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb2Q91XX7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb2Q91XX7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb2Q91XX7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb2Q91XX7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb2Q91XX7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb2Q91XX7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb2Q91XX7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhgb2Q91XX7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb2Q91XX7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb2Q91XX7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb2Q91XX7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdhgb2Q91XX7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb2Q91XX7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb2Q91XX7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb2Q91XX7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb2Q91XX7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb2Q91XX7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb2Q91XX7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb2Q91XX7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb2Q91XX7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.53■□□□□ 0.56
Pcdhgb2Q91XX7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb2Q91XX7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb2Q91XX7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pcdhgb2Q91XX7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb2Q91XX7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Pcdhgb2Q91XX7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb2Q91XX7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.52■□□□□ 0.56
Pcdhgb2Q91XX7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb2Q91XX7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhgb2Q91XX7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb2Q91XX7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb2Q91XX7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhgb2Q91XX7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Pcdhgb2Q91XX7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Pcdhgb2Q91XX7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb2Q91XX7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb2Q91XX7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
Pcdhgb2Q91XX7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb2Q91XX7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb2Q91XX7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb2Q91XX7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb2Q91XX7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pcdhgb2Q91XX7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb2Q91XX7 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.51■□□□□ 0.55
Pcdhgb2Q91XX7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms