Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb21Q91V48 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.58■□□□□ 0.72
Pcdhb21Q91V48 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb21Q91V48 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Pcdhb21Q91V48 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb21Q91V48 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb21Q91V48 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb21Q91V48 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb21Q91V48 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Pcdhb21Q91V48 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb21Q91V48 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Pcdhb21Q91V48 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 Iqck-206ENSMUST00000208658 2891 ntBASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb21Q91V48 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 Gm43137-201ENSMUST00000198052 594 ntBASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb21Q91V48 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb21Q91V48 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.55■□□□□ 0.72
Pcdhb21Q91V48 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb21Q91V48 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb21Q91V48 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb21Q91V48 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdhb21Q91V48 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdhb21Q91V48 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb21Q91V48 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb21Q91V48 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb21Q91V48 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.54■□□□□ 0.72
Pcdhb21Q91V48 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb21Q91V48 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb21Q91V48 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhb21Q91V48 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.54■□□□□ 0.72
Pcdhb21Q91V48 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb21Q91V48 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb21Q91V48 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb21Q91V48 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb21Q91V48 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.54■□□□□ 0.72
Pcdhb21Q91V48 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhb21Q91V48 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb21Q91V48 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb21Q91V48 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb21Q91V48 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb21Q91V48 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb21Q91V48 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhb21Q91V48 Gm27454-201ENSMUST00000185090 204 ntBASIC19.52■□□□□ 0.72
Pcdhb21Q91V48 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.52■□□□□ 0.72
Pcdhb21Q91V48 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb21Q91V48 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdhb21Q91V48 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb21Q91V48 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb21Q91V48 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb21Q91V48 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb21Q91V48 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms