Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H1fooQ8VIK3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H1fooQ8VIK3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.57■□□□□ 0.24
H1fooQ8VIK3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
H1fooQ8VIK3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H1fooQ8VIK3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H1fooQ8VIK3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
H1fooQ8VIK3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H1fooQ8VIK3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H1fooQ8VIK3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
H1fooQ8VIK3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
H1fooQ8VIK3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.56■□□□□ 0.24
H1fooQ8VIK3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H1fooQ8VIK3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
H1fooQ8VIK3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H1fooQ8VIK3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H1fooQ8VIK3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H1fooQ8VIK3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H1fooQ8VIK3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H1fooQ8VIK3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H1fooQ8VIK3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H1fooQ8VIK3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.55■□□□□ 0.24
H1fooQ8VIK3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H1fooQ8VIK3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H1fooQ8VIK3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H1fooQ8VIK3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.55■□□□□ 0.24
H1fooQ8VIK3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H1fooQ8VIK3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
H1fooQ8VIK3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H1fooQ8VIK3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
H1fooQ8VIK3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H1fooQ8VIK3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H1fooQ8VIK3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
H1fooQ8VIK3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.54■□□□□ 0.24
H1fooQ8VIK3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.54■□□□□ 0.24
H1fooQ8VIK3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.54■□□□□ 0.24
H1fooQ8VIK3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
H1fooQ8VIK3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
H1fooQ8VIK3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H1fooQ8VIK3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
H1fooQ8VIK3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H1fooQ8VIK3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H1fooQ8VIK3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.53■□□□□ 0.24
H1fooQ8VIK3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H1fooQ8VIK3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H1fooQ8VIK3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H1fooQ8VIK3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H1fooQ8VIK3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H1fooQ8VIK3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H1fooQ8VIK3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
H1fooQ8VIK3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
H1fooQ8VIK3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H1fooQ8VIK3 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.52■□□□□ 0.24
H1fooQ8VIK3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
H1fooQ8VIK3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H1fooQ8VIK3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
H1fooQ8VIK3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.52■□□□□ 0.24
H1fooQ8VIK3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.52■□□□□ 0.24
H1fooQ8VIK3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.52■□□□□ 0.24
H1fooQ8VIK3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H1fooQ8VIK3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H1fooQ8VIK3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
H1fooQ8VIK3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H1fooQ8VIK3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H1fooQ8VIK3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
H1fooQ8VIK3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
H1fooQ8VIK3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H1fooQ8VIK3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
H1fooQ8VIK3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.5■□□□□ 0.23
H1fooQ8VIK3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H1fooQ8VIK3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H1fooQ8VIK3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H1fooQ8VIK3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H1fooQ8VIK3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H1fooQ8VIK3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H1fooQ8VIK3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms