Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40cQ8VHQ4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Rab40cQ8VHQ4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40cQ8VHQ4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40cQ8VHQ4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40cQ8VHQ4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40cQ8VHQ4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40cQ8VHQ4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40cQ8VHQ4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40cQ8VHQ4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40cQ8VHQ4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab40cQ8VHQ4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40cQ8VHQ4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40cQ8VHQ4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40cQ8VHQ4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rab40cQ8VHQ4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40cQ8VHQ4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40cQ8VHQ4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40cQ8VHQ4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rab40cQ8VHQ4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
Rab40cQ8VHQ4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rab40cQ8VHQ4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rab40cQ8VHQ4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rab40cQ8VHQ4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rab40cQ8VHQ4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Rab40cQ8VHQ4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Cap2-205ENSMUST00000225824 1634 ntBASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rab40cQ8VHQ4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rab40cQ8VHQ4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40cQ8VHQ4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Rab40cQ8VHQ4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40cQ8VHQ4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.12■□□□□ 0.17
Rab40cQ8VHQ4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40cQ8VHQ4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40cQ8VHQ4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.12■□□□□ 0.17
Rab40cQ8VHQ4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40cQ8VHQ4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40cQ8VHQ4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab40cQ8VHQ4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab40cQ8VHQ4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab40cQ8VHQ4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40cQ8VHQ4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40cQ8VHQ4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40cQ8VHQ4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rab40cQ8VHQ4 Gm10420-201ENSMUST00000121713 882 ntBASIC16.09■□□□□ 0.17
Rab40cQ8VHQ4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40cQ8VHQ4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40cQ8VHQ4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab40cQ8VHQ4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Rab40cQ8VHQ4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab40cQ8VHQ4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms