Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Gm26571-201ENSMUST00000181399 666 ntBASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdhr1Q8VHP6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cdhr1Q8VHP6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdhr1Q8VHP6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.35■□□□□ 0.69
Cdhr1Q8VHP6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdhr1Q8VHP6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.35■□□□□ 0.69
Cdhr1Q8VHP6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdhr1Q8VHP6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cdhr1Q8VHP6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdhr1Q8VHP6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdhr1Q8VHP6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdhr1Q8VHP6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdhr1Q8VHP6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.34■□□□□ 0.69
Cdhr1Q8VHP6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.34■□□□□ 0.69
Cdhr1Q8VHP6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdhr1Q8VHP6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdhr1Q8VHP6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdhr1Q8VHP6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdhr1Q8VHP6 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.34■□□□□ 0.69
Cdhr1Q8VHP6 Gm42569-201ENSMUST00000200539 472 ntBASIC19.34■□□□□ 0.69
Cdhr1Q8VHP6 Gm42642-201ENSMUST00000200683 355 ntBASIC19.34■□□□□ 0.69
Cdhr1Q8VHP6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cdhr1Q8VHP6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.33■□□□□ 0.69
Cdhr1Q8VHP6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdhr1Q8VHP6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdhr1Q8VHP6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdhr1Q8VHP6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cdhr1Q8VHP6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdhr1Q8VHP6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdhr1Q8VHP6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr1Q8VHP6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr1Q8VHP6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr1Q8VHP6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr1Q8VHP6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr1Q8VHP6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr1Q8VHP6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.31■□□□□ 0.68
Cdhr1Q8VHP6 Gm7291-201ENSMUST00000199147 382 ntBASIC19.31■□□□□ 0.68
Cdhr1Q8VHP6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr1Q8VHP6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr1Q8VHP6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr1Q8VHP6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr1Q8VHP6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr1Q8VHP6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdhr1Q8VHP6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Cdhr1Q8VHP6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdhr1Q8VHP6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdhr1Q8VHP6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdhr1Q8VHP6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Cdhr1Q8VHP6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cdhr1Q8VHP6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.3■□□□□ 0.68
Cdhr1Q8VHP6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cdhr1Q8VHP6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdhr1Q8VHP6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdhr1Q8VHP6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cdhr1Q8VHP6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdhr1Q8VHP6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdhr1Q8VHP6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdhr1Q8VHP6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdhr1Q8VHP6 Gm29257-201ENSMUST00000186115 639 ntBASIC19.29■□□□□ 0.68
Cdhr1Q8VHP6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdhr1Q8VHP6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdhr1Q8VHP6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdhr1Q8VHP6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdhr1Q8VHP6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr1Q8VHP6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Cdhr1Q8VHP6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr1Q8VHP6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.27■□□□□ 0.68
Cdhr1Q8VHP6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr1Q8VHP6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Cdhr1Q8VHP6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.27■□□□□ 0.68
Cdhr1Q8VHP6 Gm27405-201ENSMUST00000184201 112 ntBASIC19.27■□□□□ 0.68
Cdhr1Q8VHP6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr1Q8VHP6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr1Q8VHP6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdhr1Q8VHP6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms