Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Rpa1Q8VEE4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpa1Q8VEE4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rpa1Q8VEE4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rpa1Q8VEE4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpa1Q8VEE4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpa1Q8VEE4 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpa1Q8VEE4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa1Q8VEE4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa1Q8VEE4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa1Q8VEE4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa1Q8VEE4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa1Q8VEE4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa1Q8VEE4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa1Q8VEE4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa1Q8VEE4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa1Q8VEE4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa1Q8VEE4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa1Q8VEE4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa1Q8VEE4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa1Q8VEE4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Rpa1Q8VEE4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.84■□□□□ 0.77
Rpa1Q8VEE4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa1Q8VEE4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa1Q8VEE4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa1Q8VEE4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa1Q8VEE4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpa1Q8VEE4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Rpa1Q8VEE4 Gm10420-201ENSMUST00000121713 882 ntBASIC19.83■□□□□ 0.77
Rpa1Q8VEE4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.83■□□□□ 0.77
Rpa1Q8VEE4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpa1Q8VEE4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpa1Q8VEE4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpa1Q8VEE4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpa1Q8VEE4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Rpa1Q8VEE4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa1Q8VEE4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa1Q8VEE4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa1Q8VEE4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Rpa1Q8VEE4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa1Q8VEE4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa1Q8VEE4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Rpa1Q8VEE4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa1Q8VEE4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa1Q8VEE4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Rpa1Q8VEE4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa1Q8VEE4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa1Q8VEE4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa1Q8VEE4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rpa1Q8VEE4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.81■□□□□ 0.76
Rpa1Q8VEE4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa1Q8VEE4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa1Q8VEE4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa1Q8VEE4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa1Q8VEE4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa1Q8VEE4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa1Q8VEE4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa1Q8VEE4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa1Q8VEE4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Rpa1Q8VEE4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rpa1Q8VEE4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa1Q8VEE4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa1Q8VEE4 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.8■□□□□ 0.76
Rpa1Q8VEE4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa1Q8VEE4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa1Q8VEE4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa1Q8VEE4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa1Q8VEE4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.79■□□□□ 0.76
Rpa1Q8VEE4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Rpa1Q8VEE4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa1Q8VEE4 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.79■□□□□ 0.76
Rpa1Q8VEE4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa1Q8VEE4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa1Q8VEE4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa1Q8VEE4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpa1Q8VEE4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rpa1Q8VEE4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpa1Q8VEE4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpa1Q8VEE4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpa1Q8VEE4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms