Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.08■■□□□ 1.12
Ddx39aQ8VDW0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx39aQ8VDW0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx39aQ8VDW0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx39aQ8VDW0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.07■■□□□ 1.12
Ddx39aQ8VDW0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx39aQ8VDW0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.07■■□□□ 1.12
Ddx39aQ8VDW0 Gm42569-201ENSMUST00000200539 472 ntBASIC22.07■■□□□ 1.12
Ddx39aQ8VDW0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ddx39aQ8VDW0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx39aQ8VDW0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx39aQ8VDW0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx39aQ8VDW0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.05■■□□□ 1.12
Ddx39aQ8VDW0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx39aQ8VDW0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx39aQ8VDW0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx39aQ8VDW0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.05■■□□□ 1.12
Ddx39aQ8VDW0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Ddx39aQ8VDW0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx39aQ8VDW0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx39aQ8VDW0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx39aQ8VDW0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx39aQ8VDW0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx39aQ8VDW0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx39aQ8VDW0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
Ddx39aQ8VDW0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Ddx39aQ8VDW0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx39aQ8VDW0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx39aQ8VDW0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.04■■□□□ 1.12
Ddx39aQ8VDW0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Ddx39aQ8VDW0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Ddx39aQ8VDW0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.03■■□□□ 1.12
Ddx39aQ8VDW0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx39aQ8VDW0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.03■■□□□ 1.12
Ddx39aQ8VDW0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Ddx39aQ8VDW0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx39aQ8VDW0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx39aQ8VDW0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Ddx39aQ8VDW0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.03■■□□□ 1.12
Ddx39aQ8VDW0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC22.03■■□□□ 1.12
Ddx39aQ8VDW0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx39aQ8VDW0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx39aQ8VDW0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.02■■□□□ 1.12
Ddx39aQ8VDW0 Gm29257-201ENSMUST00000186115 639 ntBASIC22.02■■□□□ 1.12
Ddx39aQ8VDW0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx39aQ8VDW0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx39aQ8VDW0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx39aQ8VDW0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx39aQ8VDW0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Ddx39aQ8VDW0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx39aQ8VDW0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx39aQ8VDW0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx39aQ8VDW0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx39aQ8VDW0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx39aQ8VDW0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx39aQ8VDW0 Gm7291-201ENSMUST00000199147 382 ntBASIC22.01■■□□□ 1.11
Ddx39aQ8VDW0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx39aQ8VDW0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx39aQ8VDW0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx39aQ8VDW0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx39aQ8VDW0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx39aQ8VDW0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ddx39aQ8VDW0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ddx39aQ8VDW0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Ddx39aQ8VDW0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ddx39aQ8VDW0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ddx39aQ8VDW0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Ddx39aQ8VDW0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx39aQ8VDW0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.99■■□□□ 1.11
Ddx39aQ8VDW0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx39aQ8VDW0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx39aQ8VDW0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx39aQ8VDW0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx39aQ8VDW0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx39aQ8VDW0 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.99■■□□□ 1.11
Ddx39aQ8VDW0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx39aQ8VDW0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx39aQ8VDW0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx39aQ8VDW0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.98■■□□□ 1.11
Ddx39aQ8VDW0 Gm18671-201ENSMUST00000214826 683 ntBASIC21.98■■□□□ 1.11
Ddx39aQ8VDW0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx39aQ8VDW0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx39aQ8VDW0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.98■■□□□ 1.11
Ddx39aQ8VDW0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Ddx39aQ8VDW0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx39aQ8VDW0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Ddx39aQ8VDW0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms