Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc1Q8VCB1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc1Q8VCB1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc1Q8VCB1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc1Q8VCB1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc1Q8VCB1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc1Q8VCB1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc1Q8VCB1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc1Q8VCB1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc1Q8VCB1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndc1Q8VCB1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndc1Q8VCB1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndc1Q8VCB1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndc1Q8VCB1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ndc1Q8VCB1 Gm26833-201ENSMUST00000180899 440 ntBASIC18.66■□□□□ 0.58
Ndc1Q8VCB1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.66■□□□□ 0.58
Ndc1Q8VCB1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndc1Q8VCB1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.66■□□□□ 0.58
Ndc1Q8VCB1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndc1Q8VCB1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndc1Q8VCB1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.65■□□□□ 0.58
Ndc1Q8VCB1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ndc1Q8VCB1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ndc1Q8VCB1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ndc1Q8VCB1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc1Q8VCB1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.63■□□□□ 0.57
Ndc1Q8VCB1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc1Q8VCB1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc1Q8VCB1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.63■□□□□ 0.57
Ndc1Q8VCB1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc1Q8VCB1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Ndc1Q8VCB1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndc1Q8VCB1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ndc1Q8VCB1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ndc1Q8VCB1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ndc1Q8VCB1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ndc1Q8VCB1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ndc1Q8VCB1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ndc1Q8VCB1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.62■□□□□ 0.57
Ndc1Q8VCB1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ndc1Q8VCB1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ndc1Q8VCB1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ndc1Q8VCB1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Gm43060-201ENSMUST00000200621 289 ntBASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Gm40848-201ENSMUST00000221998 324 ntBASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndc1Q8VCB1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ndc1Q8VCB1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms