Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubqln1Q8R317 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ubqln1Q8R317 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Ubqln1Q8R317 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.72■□□□□ 0.59
Ubqln1Q8R317 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln1Q8R317 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.72■□□□□ 0.59
Ubqln1Q8R317 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln1Q8R317 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.72■□□□□ 0.59
Ubqln1Q8R317 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.72■□□□□ 0.59
Ubqln1Q8R317 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln1Q8R317 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln1Q8R317 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln1Q8R317 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln1Q8R317 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubqln1Q8R317 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubqln1Q8R317 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubqln1Q8R317 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubqln1Q8R317 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubqln1Q8R317 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ubqln1Q8R317 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Ubqln1Q8R317 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ubqln1Q8R317 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ubqln1Q8R317 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ubqln1Q8R317 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubqln1Q8R317 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubqln1Q8R317 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubqln1Q8R317 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubqln1Q8R317 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubqln1Q8R317 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubqln1Q8R317 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ubqln1Q8R317 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubqln1Q8R317 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubqln1Q8R317 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubqln1Q8R317 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ubqln1Q8R317 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.69■□□□□ 0.58
Ubqln1Q8R317 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.69■□□□□ 0.58
Ubqln1Q8R317 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.69■□□□□ 0.58
Ubqln1Q8R317 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ubqln1Q8R317 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ubqln1Q8R317 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubqln1Q8R317 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubqln1Q8R317 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubqln1Q8R317 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubqln1Q8R317 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubqln1Q8R317 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ubqln1Q8R317 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ubqln1Q8R317 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubqln1Q8R317 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubqln1Q8R317 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubqln1Q8R317 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubqln1Q8R317 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.67■□□□□ 0.58
Ubqln1Q8R317 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubqln1Q8R317 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ubqln1Q8R317 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubqln1Q8R317 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubqln1Q8R317 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ubqln1Q8R317 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ubqln1Q8R317 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubqln1Q8R317 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubqln1Q8R317 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubqln1Q8R317 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubqln1Q8R317 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubqln1Q8R317 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubqln1Q8R317 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubqln1Q8R317 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ubqln1Q8R317 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.64■□□□□ 0.57
Ubqln1Q8R317 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubqln1Q8R317 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubqln1Q8R317 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Ubqln1Q8R317 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms