Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
Chmp7Q8R1T1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.68
Chmp7Q8R1T1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Chmp7Q8R1T1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Chmp7Q8R1T1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Chmp7Q8R1T1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC25.51■■□□□ 1.67
Chmp7Q8R1T1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC25.51■■□□□ 1.67
Chmp7Q8R1T1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Chmp7Q8R1T1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Chmp7Q8R1T1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Chmp7Q8R1T1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Chmp7Q8R1T1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Chmp7Q8R1T1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Chmp7Q8R1T1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Chmp7Q8R1T1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Chmp7Q8R1T1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Chmp7Q8R1T1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC25.49■■□□□ 1.67
Chmp7Q8R1T1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Chmp7Q8R1T1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC25.49■■□□□ 1.67
Chmp7Q8R1T1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC25.49■■□□□ 1.67
Chmp7Q8R1T1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC25.49■■□□□ 1.67
Chmp7Q8R1T1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Chmp7Q8R1T1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Chmp7Q8R1T1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Chmp7Q8R1T1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Chmp7Q8R1T1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Chmp7Q8R1T1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Chmp7Q8R1T1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC25.48■■□□□ 1.67
Chmp7Q8R1T1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Chmp7Q8R1T1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Chmp7Q8R1T1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Chmp7Q8R1T1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
Chmp7Q8R1T1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Chmp7Q8R1T1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Chmp7Q8R1T1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Chmp7Q8R1T1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Chmp7Q8R1T1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Chmp7Q8R1T1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Chmp7Q8R1T1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Chmp7Q8R1T1 Gm32051-202ENSMUST00000197905 2385 ntBASIC25.46■■□□□ 1.67
Chmp7Q8R1T1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
Chmp7Q8R1T1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Chmp7Q8R1T1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Chmp7Q8R1T1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Chmp7Q8R1T1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Chmp7Q8R1T1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Chmp7Q8R1T1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Chmp7Q8R1T1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Chmp7Q8R1T1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Chmp7Q8R1T1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Chmp7Q8R1T1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Chmp7Q8R1T1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC25.45■■□□□ 1.66
Chmp7Q8R1T1 AC112142.1-201ENSMUST00000228796 918 ntBASIC25.45■■□□□ 1.66
Chmp7Q8R1T1 Gm10602-201ENSMUST00000098239 609 ntBASIC25.45■■□□□ 1.66
Chmp7Q8R1T1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Chmp7Q8R1T1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Chmp7Q8R1T1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Chmp7Q8R1T1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Chmp7Q8R1T1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Chmp7Q8R1T1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Chmp7Q8R1T1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
Chmp7Q8R1T1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Chmp7Q8R1T1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC25.43■■□□□ 1.66
Chmp7Q8R1T1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Chmp7Q8R1T1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC25.43■■□□□ 1.66
Chmp7Q8R1T1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Chmp7Q8R1T1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Chmp7Q8R1T1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC25.43■■□□□ 1.66
Chmp7Q8R1T1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Chmp7Q8R1T1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Chmp7Q8R1T1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Chmp7Q8R1T1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Chmp7Q8R1T1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Chmp7Q8R1T1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Chmp7Q8R1T1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Chmp7Q8R1T1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Chmp7Q8R1T1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Chmp7Q8R1T1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Chmp7Q8R1T1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Chmp7Q8R1T1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Chmp7Q8R1T1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Chmp7Q8R1T1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Chmp7Q8R1T1 Gm12933-201ENSMUST00000120203 872 ntBASIC25.4■■□□□ 1.66
Chmp7Q8R1T1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC25.4■■□□□ 1.66
Chmp7Q8R1T1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Chmp7Q8R1T1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Chmp7Q8R1T1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Chmp7Q8R1T1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Chmp7Q8R1T1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC25.39■■□□□ 1.66
Chmp7Q8R1T1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
Chmp7Q8R1T1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC25.39■■□□□ 1.66
Chmp7Q8R1T1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Chmp7Q8R1T1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Chmp7Q8R1T1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Chmp7Q8R1T1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
Chmp7Q8R1T1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Chmp7Q8R1T1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Chmp7Q8R1T1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Chmp7Q8R1T1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Chmp7Q8R1T1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC25.38■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms