Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nudcd3Q8R1N4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Nudcd3Q8R1N4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Nudcd3Q8R1N4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nudcd3Q8R1N4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nudcd3Q8R1N4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nudcd3Q8R1N4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd3Q8R1N4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd3Q8R1N4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd3Q8R1N4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd3Q8R1N4 Mir6538-201ENSMUST00000183713 110 ntBASIC19.77■□□□□ 0.76
Nudcd3Q8R1N4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd3Q8R1N4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd3Q8R1N4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd3Q8R1N4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nudcd3Q8R1N4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nudcd3Q8R1N4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd3Q8R1N4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd3Q8R1N4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd3Q8R1N4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd3Q8R1N4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd3Q8R1N4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.76■□□□□ 0.75
Nudcd3Q8R1N4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd3Q8R1N4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nudcd3Q8R1N4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nudcd3Q8R1N4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nudcd3Q8R1N4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd3Q8R1N4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd3Q8R1N4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd3Q8R1N4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd3Q8R1N4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nudcd3Q8R1N4 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.74■□□□□ 0.75
Nudcd3Q8R1N4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd3Q8R1N4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Nudcd3Q8R1N4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd3Q8R1N4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd3Q8R1N4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nudcd3Q8R1N4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nudcd3Q8R1N4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nudcd3Q8R1N4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nudcd3Q8R1N4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nudcd3Q8R1N4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.73■□□□□ 0.75
Nudcd3Q8R1N4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nudcd3Q8R1N4 Gm45444-201ENSMUST00000211394 898 ntBASIC19.73■□□□□ 0.75
Nudcd3Q8R1N4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nudcd3Q8R1N4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nudcd3Q8R1N4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nudcd3Q8R1N4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd3Q8R1N4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd3Q8R1N4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nudcd3Q8R1N4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd3Q8R1N4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd3Q8R1N4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd3Q8R1N4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd3Q8R1N4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.72■□□□□ 0.75
Nudcd3Q8R1N4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nudcd3Q8R1N4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nudcd3Q8R1N4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd3Q8R1N4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nudcd3Q8R1N4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd3Q8R1N4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd3Q8R1N4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd3Q8R1N4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.71■□□□□ 0.75
Nudcd3Q8R1N4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd3Q8R1N4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd3Q8R1N4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd3Q8R1N4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Nudcd3Q8R1N4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nudcd3Q8R1N4 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.7■□□□□ 0.74
Nudcd3Q8R1N4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd3Q8R1N4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd3Q8R1N4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nudcd3Q8R1N4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.7■□□□□ 0.74
Nudcd3Q8R1N4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd3Q8R1N4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd3Q8R1N4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd3Q8R1N4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd3Q8R1N4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.7■□□□□ 0.74
Nudcd3Q8R1N4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nudcd3Q8R1N4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nudcd3Q8R1N4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms