Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.4□□□□□ -0.42
Cystm1Q8K353 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cystm1Q8K353 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cystm1Q8K353 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cystm1Q8K353 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cystm1Q8K353 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cystm1Q8K353 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cystm1Q8K353 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cystm1Q8K353 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cystm1Q8K353 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cystm1Q8K353 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cystm1Q8K353 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.39□□□□□ -0.43
Cystm1Q8K353 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Cystm1Q8K353 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cystm1Q8K353 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC12.38□□□□□ -0.43
Cystm1Q8K353 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.38□□□□□ -0.43
Cystm1Q8K353 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cystm1Q8K353 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Gm5522-201ENSMUST00000189483 1242 ntBASIC12.37□□□□□ -0.43
Cystm1Q8K353 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC12.37□□□□□ -0.43
Cystm1Q8K353 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cystm1Q8K353 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC12.36□□□□□ -0.43
Cystm1Q8K353 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cystm1Q8K353 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cystm1Q8K353 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms