Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
Rtn1Q8K0T0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rtn1Q8K0T0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rtn1Q8K0T0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rtn1Q8K0T0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rtn1Q8K0T0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.93■■□□□ 1.26
Rtn1Q8K0T0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rtn1Q8K0T0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rtn1Q8K0T0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rtn1Q8K0T0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rtn1Q8K0T0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.92■■□□□ 1.26
Rtn1Q8K0T0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Rtn1Q8K0T0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Rtn1Q8K0T0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rtn1Q8K0T0 Gm5576-201ENSMUST00000075809 1236 ntBASIC22.92■■□□□ 1.26
Rtn1Q8K0T0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rtn1Q8K0T0 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.92■■□□□ 1.26
Rtn1Q8K0T0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rtn1Q8K0T0 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.92■■□□□ 1.26
Rtn1Q8K0T0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rtn1Q8K0T0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
Rtn1Q8K0T0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Rtn1Q8K0T0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rtn1Q8K0T0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.91■■□□□ 1.26
Rtn1Q8K0T0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC22.91■■□□□ 1.26
Rtn1Q8K0T0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Rtn1Q8K0T0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rtn1Q8K0T0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.91■■□□□ 1.26
Rtn1Q8K0T0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rtn1Q8K0T0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rtn1Q8K0T0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Rtn1Q8K0T0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rtn1Q8K0T0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rtn1Q8K0T0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rtn1Q8K0T0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Rtn1Q8K0T0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
Rtn1Q8K0T0 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.89■■□□□ 1.25
Rtn1Q8K0T0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rtn1Q8K0T0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rtn1Q8K0T0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rtn1Q8K0T0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Rtn1Q8K0T0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rtn1Q8K0T0 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.89■■□□□ 1.25
Rtn1Q8K0T0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Rtn1Q8K0T0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Rtn1Q8K0T0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.88■■□□□ 1.25
Rtn1Q8K0T0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rtn1Q8K0T0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rtn1Q8K0T0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rtn1Q8K0T0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
Rtn1Q8K0T0 Gm12821-201ENSMUST00000120022 600 ntBASIC22.88■■□□□ 1.25
Rtn1Q8K0T0 Gm27454-201ENSMUST00000185090 204 ntBASIC22.88■■□□□ 1.25
Rtn1Q8K0T0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn1Q8K0T0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn1Q8K0T0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn1Q8K0T0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn1Q8K0T0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.86■■□□□ 1.25
Rtn1Q8K0T0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Rtn1Q8K0T0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtn1Q8K0T0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtn1Q8K0T0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtn1Q8K0T0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtn1Q8K0T0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtn1Q8K0T0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtn1Q8K0T0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 Gm12251-201ENSMUST00000117893 792 ntBASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn1Q8K0T0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Rtn1Q8K0T0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Rtn1Q8K0T0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rtn1Q8K0T0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rtn1Q8K0T0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.25
Rtn1Q8K0T0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rtn1Q8K0T0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Rtn1Q8K0T0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rtn1Q8K0T0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.82■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms